Biomedical Applications of Vibrational Spectroscopy - Hyperspectral Imaging - Chemometrics
Selected scientific studies for which CytoSpec has been used (list incomplete, last revision Jul 2026)
Wang, Y., M. Li, P. Yang, J. Lu, et al.
Decoding Biofilm-Surface Interactions: A Hyperspectral Infrared Platform Links Interfacial Chemistry To Stress Adaptation and Assembly Mechanism. Langmuir, 2026. 42(21): p. 14685–14695. https://www.ncbi.nlm.nih.gov/pubmed/42154003
Wang, Y., Y. Ding, C. He, X. Zhou, et al.
CIAdex: Label-Free Cell Identification and Aging Quantification Using Single-Cell Infrared Spectral Fingerprints. Advanced Photonics Research, 2026. 7(4): p. e202500258. https://doi.org/10.1002/adpr.202500258
Thumanu, K., S. Wattanavanitchakorn, R. Wansuksri, S. Cael, et al.
Infrared imaging and multivariate analysis of structure, bioactive compounds, and starch digestibility of dough and mature stages rice. Journal of Cereal Science, 2026. 128: p. 104396. https://dx.doi.org/10.1016/j.jcs.2026.104396
Soni, T., D.E. Bedolla, and B.R. Wood
Biological and Biomedical Applications of Optical Photothermal Infrared Spectroscopy (O-PTIR). Appl Spectrosc, 2026: p. 37028261447532. https://www.ncbi.nlm.nih.gov/pubmed/42142002
Seredin, P., D. Goloshchapov, T. Litvinova, Y. Peshkov, et al.
Electric Field-Guided Biomimetic Mineralization of Enamel via Interfacial Engineering of Nanostructured HAp/PDA Coatings with Anisotropy and Enhanced Hardness. ACS Biomater Sci Eng, 2026. 12(4): p. 2130–2155. https://www.ncbi.nlm.nih.gov/pubmed/41778555
Santoni, C., G. Orilisi, S. Greco, V. Notarstefano, et al.
Data science meets FTIR Imaging: a promising probe to improve the diagnosis of human uterine muscle lesions. Spectrochim Acta A Mol Biomol Spectrosc, 2026. 353: p. 127572. https://www.ncbi.nlm.nih.gov/pubmed/41707626
Pieta, E., A. Panek, M. Szczepanek-Dulska, and K. Pogoda
Vimentin-targeting adaptogen withaferin A: Potential to selectively suppress cervical cancer - Single-cell microspectroscopic and molecular analysis. Biochim Biophys Acta Mol Basis Dis, 2026. 1872(3): p. 168125. https://www.ncbi.nlm.nih.gov/pubmed/41308894
Pham, T., P. Zhang, Z. Xu, Q.T. Luu, et al.
Plasma-engineered microalgal coatings for modulating inflammation, preventing infection, and promoting tissue homeostasis. Cell Biomaterials, 2026. 2(6). https://dx.doi.org/10.1016/j.celbio.2026.100347
Nguyen, T.T., B. Indraratna, R. Gedela, and J. Vongsvivut
The Monotonic and Cyclic Shear Behaviour of Low Plasticity Soil Treated with Biopolymer. Canadian Geotechnical Journal, 2026. https://doi.org/10.1139/cgj-2025-1040
Li, W., H. Zhang, Z. Wang, N.H. Nguyen, et al.
Non-Thermal Plasma-Induced Selective Glycosidic Cleavage in Chitosan Produces Multifunctional Antibacterial Wound Care Biomaterials. Advanced Functional Materials, 2026. 36(33): p. e19776. https://dx.doi.org/10.1002/adfm.202519776
Li, M., X. Li, N. Ju, J. Lu, et al.
Multiscale chemical cartography of single cells: Deconstructing endothelial heterogeneity with synchrotron infrared microspectroscopy. Spectrochim Acta A Mol Biomol Spectrosc, 2026. 357: p. 127793. https://www.ncbi.nlm.nih.gov/pubmed/41916207
Kuhnert, P., I. Brodard, and J. Jores
Staphylococcus dromedarii sp. nov., isolated from dromedary (Camelus dromedarius). Int J Syst Evol Microbiol, 2026. 76(7). https://www.ncbi.nlm.nih.gov/pubmed/42384040
Kapuralage, W.P., J. Fletcher, K.S. Iyer, and S. Ciampi
Turning Electrode Orientation into a Design Parameter: Gravity-Driven Convection for Coupling Electrochemical and Enzymatic Reactions. ChemElectroChem, 2026. 13(11): p. e70233. https://dx.doi.org/10.1002/celc.70233
Gharehgozlo, S., S.A. Polash, K.A. Mirihana, J. Matusiak, et al.
Harnessing Bacterial Lipid Coatings on Gold Nanoparticles for Enhanced Cell Adhesion Applications. Small Sci, 2026. 6(2): p. e202500584. https://www.ncbi.nlm.nih.gov/pubmed/41709880
Fothedar, D.K., J. Hou, R.K. Balu, J. Vongsvivut, et al.
Electrospun mixed matrix nanofiber membranes for sustainable dye removal from textile wastewater. Chemical Engineering Journal, 2026. 532: p. 174239. https://doi.org/10.1016/j.cej.2026.174239
Ding, D.Y., V.A. Bot, K.L. Chen, J.W. Groves, et al.
Plasma proteomic signatures of cellular aging predict human disease. Nat Med, 2026. 32(6): p. 2060–2072. https://www.ncbi.nlm.nih.gov/pubmed/42297981
Chinnakorn, A., O. Weeranantanapan, K. Thumanu, P. Poopisut, et al.
Synchrotron FTIR Microspectroscopy Imaging for Evaluating Cell Distribution on Electrospun Fibrous Scaffolds. ACS Omega, 2026. 11(20): p. 29933–29942. https://www.ncbi.nlm.nih.gov/pubmed/42222819
Bednarczyk, Z., T. Daniluk, E. Piktel, R. Bucki, et al.
AFM-IR Insights Into Cell Wall Remodeling and Protein Reorganization in Candida auris Versus Candida albicans. ACS Omega, 2026. 11(11): p. 17720–17731. https://www.ncbi.nlm.nih.gov/pubmed/41908363
Zahra, S.T., Ł. Chajec, K.M. Tokarz, W. Makowski, et al.
UVC light–induced metabolic modifications at the level of the plant cells and tissue determined by FTIR and Raman spectralomics. SSRN, 2025. (preprint). http://dx.doi.org/10.2139/ssrn.5877267
Yang, P., Y. Wang, F. Geng, J. Lü, et al.
Infrared phenomics with 2D-COS unveils spatial heterogeneity and chemical evolution in a microbial biofilm. Vibrational Spectroscopy, 2025. 140: p. 103846. https://dx.doi.org/10.1016/j.vibspec.2025.103846
Wójtowicz, A., A. Mitura, U. Bracha, Z. Arent, et al.
Post-mortem changes in tissue samples captured by infrared spectroscopy – studies in a rabbit model. Microchemical Journal, 2025. 213: p. 113803. https://dx.doi.org/10.1016/j.microc.2025.113803
Wang, Y., Y. Ding, C. He, X. Zhou, et al.
CIAdex: Single-Cell FTIR Spectral Fingerprinting for Cell Identity Verification and Aging Quantification in Therapeutic Cell Manufacturing. bioRxiv, 2025: p. 2025.07.31.667910. http://biorxiv.org/content/early/2025/08/02/2025.07.31.667910.abstract
Tran, T.L.C., A.R. Klein, J. Vongsvivut, Y. Wang, et al.
Synchrotron macro-ATR-FTIR: a powerful technique for analyzing changes in plant cell chemical composition after surfactant exposure. Plant J, 2025. 122(4): p. e70227. https://www.ncbi.nlm.nih.gov/pubmed/40408558
Soini, S.A., N. Domingo, M. Ozparpucu, E. Windeisen-Holzhauser, et al.
Nanoscale Examination of Chemical and Enzymatic Degradation of Plant Cell Walls. Biomacromolecules, 2025. 26(12): p. 8630–8640. https://www.ncbi.nlm.nih.gov/pubmed/41277509
Soini, S.A.
Mineralization, Characterization and Selective Degradation of Lignocellulosic Biocomposite Materials. Florida Atlantic University, 2025. PhD Thesis. https://digitalcommons.fau.edu/etd_general/20/
Seredin, P.V., D.L. Goloshchapov, D.E. Kostomakha, Y.A. Peshkov, et al.
Influence of high-energy helium ions on the characteristics of GaN epilayers with different n-type doping levels, grown on GaN-MOCVD/c-Al2O3 templates by PA MBE. Surfaces and Interfaces, 2025. 72: p. 107275. https://dx.doi.org/10.1016/j.surfin.2025.107275
Scanaliato, J.P., D.J. Hall, S. Liu, G.P. Nicholson, et al.
Suture debris from high-tensile sutures contributes significantly to particle-induced tissue response in shoulder arthroplasty. J Shoulder Elbow Surg, 2025. 34(6S): p. S106–S116. https://www.ncbi.nlm.nih.gov/pubmed/40015472
Reeve, K., N. Dempsey, B. Milford, M. Willans, et al.
A comparison of synchrotron micro-FTIR spectroscopic analysis of lipid composition in frozen-hydrated and air-dried mouse brain tissue. Infrared Physics & Technology, 2025. 151: p. 106138. https://dx.doi.org/10.1016/j.infrared.2025.106138
Pragnaca, A., A. Antolak, Z.J. Krysiak, M. Lesniak, et al.
Marker-independent vibrational spectroscopy imaging recognizes the hypoxia effect in the human brain endothelium. Sci Rep, 2025. 15(1): p. 26112. https://www.ncbi.nlm.nih.gov/pubmed/40681622
Pieta, L., A. Kisielewska, A. Warzybok, I. Piwonski, et al.
Long-lived photoexcitation probed by photo-induced enhanced Raman spectroscopy: unveiling charge dynamics in Ag-TiO(2) nano-heterojunctions. Sci Rep, 2025. 15(1): p. 5587. https://www.ncbi.nlm.nih.gov/pubmed/39955436
Paschalis, E.P. and G. Mabilleau, Fourier Transform Infrared Imaging of Bone, in Bone Research Protocols, A.I. Idris, Editor. 2025, Springer US: New York, NY. p. 671–681.
Lammer, M., M. Schmuth, P. Bellmann, V. Moosbrugger-Martinz, et al.
Exploring Fourier-Transform Infrared Microscopy for Scabies Mite Detection in Human Tissue Sections: A Preliminary Technical Feasibility Study. Int J Mol Sci, 2025. 26(23). https://www.ncbi.nlm.nih.gov/pubmed/41373748
Konkol, J.A.
Advanced Spectroscopic Analytical Techniques in Chemical Reaction Engineering for Pharmaceutical Systems. Rutgers University, 2025. PhD Thesis. https://dx.doi.org/10.7282/t3-dh68-3t84
Komaniecka, I., K. Zebracki, A. Mazur, K. Susniak, et al.
The Absence of a Very Long Chain Fatty Acid (VLCFA) in Lipid A Impairs Agrobacterium fabrum Plant Infection and Biofilm Formation and Increases Susceptibility to Environmental Stressors. Molecules, 2025. 30(5). https://www.ncbi.nlm.nih.gov/pubmed/40076305
Huang, L.Z.Y., R. Penman, R. Kariuki, P.H.A. Vaillant, et al.
Graveyard effects of antimicrobial nanostructured titanium over prolonged exposure to drug resistant bacteria and fungi. Nanoscale, 2025. 17(6): p. 3170–3188. https://www.ncbi.nlm.nih.gov/pubmed/39713977
Hollings, A.L., G.C. Ellison, M. Willans, V. Lam, et al.
Subventricular Accumulation of Cu in the Aging Mouse Brain Does Not Associate with Anticipated Increases in Markers of Oxidative Stress. ACS Chem Neurosci, 2025. 16(3): p. 292–302. https://www.ncbi.nlm.nih.gov/pubmed/39873122
Garemark, J., M. Ritter, C.H. Dreimol, R. Lopes Laranjeira, et al.
Salt-In-Wood Piezoelectric Power Generators with Circular Materials Design for High-Performance Sustainable Energy Harvesting. Advanced Functional Materials, 2025. 35(25): p. 2418454. https://doi.org/10.1002/adfm.202418454
Dreimol, C.H., J. Edberg, R. Kürsteiner, M. Ritter, et al.
Iron-Catalyzed Laser-Induced Graphitization Enabling Current Collector-Free Electrodes With Spatially Tunable Iron/Iron Oxide Phases. Advanced Materials, 2025. 37(41): p. e08812. https://doi.org/10.1002/adma.202508812
Detwiler Gray, C., A. Coronel-Zegarra, A. Martin, O. Wang, et al.
Engineering Curved Strontium Sulfate Crystals through Biomimetic Crystallization. ACS Applied Materials & Interfaces, 2025. 17(45): p. 62239–62250. https://dx.doi.org/10.1021/acsami.5c10415
Dariusz, K., B. Gieroba, K. Niedzwiadek, M. Krysa, et al.
Evaluation of Film-Forming Properties of alpha-1,3-Glucan Obtained from "Chicken of the Woods" Mushroom (Laetiporus sulphureus): Film Development, Characterization, and Biodegradation Assessment. Molecules, 2025. 30(7). https://www.ncbi.nlm.nih.gov/pubmed/40286251
Arunachalam, N., R. Balu, J. Vongsvivut, N.K. Dutta, et al.
Rapid photo-crosslinkable pectin methacrylate reinforced self-healing adhesive hydrogels. Polymer, 2025. 338: p. 129090. https://dx.doi.org/10.1016/j.polymer.2025.129090
Alemie, M.N., R. Bright, N. Ninan, T. Ngoc Le, et al.
Deciphering the Role of Biomaterial Surface Chemistry in Toll-Like Receptor-Mediated Immune Modulation. ACS Biomater Sci Eng, 2025. 11(11): p. 6575–6592. https://www.ncbi.nlm.nih.gov/pubmed/40561158
Alemie, M.N., R. Bright, N. Ninan, P.R. Dabare, et al.
Biomaterial Surface Nanotopography Induced IgG Unfolding Modulates Macrophage Innate Immune Responses. ACS Appl Mater Interfaces, 2025. 17(35): p. 49286–49303. https://www.ncbi.nlm.nih.gov/pubmed/40757611
Yin, J.
Nanocellulose-based materials for sustainable soil remediation and water purification. Faculty of Graduate Studies and Research, University of Regina, 2024. PhD Thesis. https://hdl.handle.net/10294/16859
Wang, Y., Y. Wang, J. Lu, and X. Li
Unraveling the Drug Response Heterogeneity with Single-Cell Vibrational Phenomics. Cell Biochem Biophys, 2024. 82(3): p. 2503–2510. https://www.ncbi.nlm.nih.gov/pubmed/38914839
Togni, L., M. Furlani, A. Belloni, N. Riberti, et al.
Biomolecular alterations temporally anticipate microarchitectural modifications of collagen in oral tongue squamous cell carcinoma. iScience, 2024. 27(7): p. 110303. https://www.ncbi.nlm.nih.gov/pubmed/39040062
Stanca, S.E., S. Mogavero, W. Fritzsche, C. Krafft, et al.
Isotope labeled 3D-Raman confocal imaging and atomic force microscopy study on epithelial cells interacting with the fungus Candida albicans. Nanomedicine, 2024. 59: p. 102750. https://www.ncbi.nlm.nih.gov/pubmed/38734040
Somu, D.R.
Looking into the Deep: Investigating Micro- and Nanoscale Biomineral Architecture of Marine Organisms Using Advanced Characterization Techniques. Florida Atlantic University, 2024. PhD Thesis. https://bib-pubdb1.desy.de/record/617780
Soini, S.A., S.M. Feliciano, B.G. Duersch, and V.M. Merk
Nanocrystalline iron hydroxide lignocellulose filters for arsenate remediation. RSC Sustainability, 2024. http://dx.doi.org/10.1039/D3SU00326D
Seredin, P.V., S.S. Sharofidinov, D.L. Goloshchapov, Y.A. Peshkov, et al.
Nanoscale Raman mapping of elastic stresses in multilayer heterostructure based on multi-period GaN/AlN superlattices grown using HVPE technology on hybrid SiC/Si substrate. Optical Materials, 2024. 150: p. 115184. https://doi.org/10.1016/j.optmat.2024.115184
Seredin, P.V., D.L. Goloshchapov, D.E. Kostomakha, Y.A. Peshkov, et al.
Comparative studies of GaN, n-GaN and n+-GaN contact layers on GaN/c-Al2O3 virtual substrates synthesized by PA MBE. Optical Materials, 2024. 152: p. 115471. https://dx.doi.org/10.1016/j.optmat.2024.115471
Rawat, S., J. Vongsvivut, L. Zhang, and Y.X. Zhang
Mechanical performance and microstructure evolution of MgO-doped high volume GGBFS-based engineered cementitious composites at room and elevated temperatures. Journal of Building Engineering, 2024. 98: p. 111437. https://dx.doi.org/10.1016/j.jobe.2024.111437
Raja Somu, D., M. Fuentes, L. Lou, A. Agarwal, et al.
Revealing chemistry-structure-function relationships in shark vertebrae across length scales. Acta Biomaterialia, 2024. 189: p. 377–387. https://dx.doi.org/10.1016/j.actbio.2024.09.041
Prater, C.B., K.J. Kjoller, A.P.D. Stuart, D.A. Grigg, et al.
Widefield Super-Resolution Infrared Spectroscopy and Imaging of Autofluorescent Biological Materials and Photosynthetic Microorganisms Using Fluorescence Detected Photothermal Infrared (FL-PTIR). Appl Spectrosc, 2024. 78(11): p. 1208–1219. https://www.ncbi.nlm.nih.gov/pubmed/38803165
Prater, C.B., M. Kansiz, and J.-X. Cheng
A tutorial on optical photothermal infrared (O-PTIR) microscopy. APL Photonics, 2024. 9(9). https://dx.doi.org/10.1063/5.0219983
Penman, R., R. Kariuki, Z.L. Shaw, C. Dekiwadia, et al.
Gold nanoparticle adsorption alters the cell stiffness and cell wall bio-chemical landscape of Candida albicans fungal cells. J Colloid Interface Sci, 2024. 654(Pt A): p. 390–404. https://www.ncbi.nlm.nih.gov/pubmed/37852025
Nowakowska, A.M., P. Dawiec, K. Chrabąszcz, A. Pieczara, et al.
Cellular lipid droplets observed in absorption, emission, and scattering – potential and limitations of various spectroscopic methods. Asian Journal of Physics, 2024. 33(1&2): p. 1–14.
Mastantuoni, G.G., V.C. Tran, J. Garemark, C.H. Dreimol, et al.
Rationally designed conductive wood with mechanoresponsive electrical resistance. Composites Part A: Applied Science and Manufacturing, 2024. 178: p. 107970. https://dx.doi.org/10.1016/j.compositesa.2023.107970
Leibnitz, O., C.H. Dreimol, S. Stucki, D. Sanz-Pont, et al.
Renewable wood-phase change material composites for passive temperature regulation of buildings. Next Materials, 2024. 2: p. 100132. https://dx.doi.org/10.1016/j.nxmate.2024.100132
Krysa, M., K. Susniak, C.L. Song, M. Szymanska-Chargot, et al.
Multimodal Spectroscopic Studies to Evaluate the Effect of Nod-Factor-Based Fertilizer on the Maize (Zea mays) Stem. Appl Spectrosc, 2024. 78(6): p. 591–604. https://www.ncbi.nlm.nih.gov/pubmed/38529584
Koch, S.
Towards Bio-Based Delignified Wood-Reinforced Composites with Aqueous Matrix Systems. ETH Zürich, 2024. PhD Thesis. https://doi.org/10.3929/ethz-b-000673818
Kamińska, K., M. Tchurzyk, O. Fraczek, A. Szlaga, et al.
Effect of Vitamin D3 on Uterine Morphology and Insulin Signaling in a Polycystic Ovary Syndrome (PCOS) Rat Model. Annals of Animal Science, 2024. 24(4): p. 1197– 1209. https://dx.doi.org/10.2478/aoas-2024-0038
Huang, L.
Investigating Nanostructured Titanium Surfaces for Advanced Antimicrobial Applications. RMIT University, 2024. PhD Thesis. https://doi.org/10.25439/rmt.28711523
Guo, H., X. Wang, C. Li, H.F. Mohamed, et al.
Ignited competition: Impact of bioactive extracellular compounds on organelle functions and photosynthetic systems in harmful algal blooms. Plant Cell Environ, 2024. 47(12): p. 4615–4629. https://www.ncbi.nlm.nih.gov/pubmed/39047015
Dreimol, C.H., R. Kursteiner, M. Ritter, A. Parrilli, et al.
Iron-Catalyzed Laser-Induced Graphitization - Multiscale Analysis of the Structural Evolution and Underlying Mechanism. Small, 2024. 20(49): p. e2405558. https://www.ncbi.nlm.nih.gov/pubmed/39279332
Cao, Y., B. Zhang, X. Song, G. Dong, et al.
Polyhydroxybutyrate Plastics Show Rapid Disintegration and More Straightforward Biogeochemical Impacts than Polyethylene under Marine Biofragmentation. Environ Sci Technol, 2024. 58(32): p. 14496–14505. https://www.ncbi.nlm.nih.gov/pubmed/39047231
Brunner, A., S.H. Unterberger, H. Auer, T. Hautz, et al.
Suitability of Fourier transform infrared microscopy for the diagnosis of cystic echinococcosis in human tissue sections. J Biophotonics, 2024: p. e202300513. https://www.ncbi.nlm.nih.gov/pubmed/38531615
Bhattacharya, S., A. Page, and P. Shinde
Development and Evaluation of Potato Starch and Chitosan Modified Capecitabine Nanoparticles for Enhanced Colon Cancer Treatment: A Comprehensive Study on PhysicalProperties, In vitro Efficacy, and In vivo Targeting. Research Square, 2024. (preprint). https://doi.org/10.21203/rs.3.rs-3849444/v1
Benetti, C., A. Blay, L. Correa, M.A. Verlangieri, et al.
ATR-FTIR spectroscopy imaging of bone repair in mandibular laser-osteotomy. J Biophotonics, 2024: p. e202400066. https://www.ncbi.nlm.nih.gov/pubmed/39048930
Belloni, A., G. Argentieri, G. Orilisi, V. Notarstefano, et al.
New insights on collagen structural organization and spatial distribution around dental implants: a comparison between machined and laser-treated surfaces. J Transl Med, 2024. 22(1): p. 120. https://www.ncbi.nlm.nih.gov/pubmed/38297308
Augustyniak, K., M. Lesniak, H. Latka, M.P. Golan, et al.
Adipose-derived mesenchymal stem cells' adipogenesis chemistry analyzed by FTIR and Raman metrics. J Lipid Res, 2024. 65(7): p. 100573. https://www.ncbi.nlm.nih.gov/pubmed/38844049
Augustyniak, K., M. Lesniak, M.P. Golan, H. Latka, et al.
Chemical Landscape of Adipocytes Derived from 3T3-L1 Cells Investigated by Fourier Transform Infrared and Raman Spectroscopies. Int J Mol Sci, 2024. 25(22). https://www.ncbi.nlm.nih.gov/pubmed/39596337
Alemie, M.N., R. Bright, N.H. Nguyen, V.K. Truong, et al.
Surface Chemistry Induced IgG Unfolding and Modulation of Immune Responses. ACS Appl Mater Interfaces, 2024. 16(38): p. 50507–50523. https://www.ncbi.nlm.nih.gov/pubmed/39263871
Yang, M., B. Zhang, X. Chen, Q. Kang, et al.
Transport of Microplastic and Dispersed Oil Co-contaminants in the Marine Environment. Environ Sci Technol, 2023. 57(14): p. 5633–5645. https://www.ncbi.nlm.nih.gov/pubmed/36972473
Willans, M., E. Szczecinski, C. Roocke, S. Williams, et al.
Development of a rapid detection protocol for microplastics using reflectance-FTIR spectroscopic imaging and multivariate classification. Environmental Science: Advances, 2023. 2(4): p. 663–674. http://dx.doi.org/10.1039/D2VA00313A
Wang, Y., H. Liu, F. Geng, P. Yang, et al.
Label-free analysis of biofilm phenotypes by infrared micro- and correlation spectroscopy. Anal Bioanal Chem, 2023. 415(17): p. 3515–3523. https://www.ncbi.nlm.nih.gov/pubmed/37193875
Veettil, T.C.P., R.N. Duffin, S. Roy, P.C. Andrews, et al.
Biochemical characterization and discrimination of Leishmania major parasites and infected macrophages with Raman spectroscopy and chemometrics. Clinical Spectroscopy, 2023. 5: p. 100024. https://dx.doi.org/10.1016/j.clispe.2023.100024
Thepbandit, W., A. Srisuwan, S. Siriwong, S. Nawong, et al.
Bacillus vallismortis TU-Orga21 blocks rice blast through both direct effect and stimulation of plant defense. Front Plant Sci, 2023. 14: p. 1103487. https://www.ncbi.nlm.nih.gov/pubmed/36890906
Seredin, P., D. Goloshchapov, N. Buylov, V. Kashkarov, et al.
A Study of the Peculiarities of the Formation of a Hybrid Interface Based on Polydopamine between Dental Tissues and Dental Composites, Using IR and Raman Microspectroscopy, at the Submicron Level. Int J Mol Sci, 2023. 24(14). https://www.ncbi.nlm.nih.gov/pubmed/37511394
Ranathunga, A., K. Thumanu, W. Kiatponglarp, S. Siriwong, et al.
Image mapping of biological changes and structure-function relationship during rice grain development via Synchrotron FTIR spectroscopy. Food Chemistry Advances, 2023. 2: p. 100290. https://dx.doi.org/10.1016/j.focha.2023.100290
Pax, A.P., L. Ong, R.A. Pax, J. Vongsvivut, et al.
Industrial freezing and tempering for optimal functional properties in thawed Mozzarella cheese. Food Chem, 2023. 405(Pt B): p. 134933. https://www.ncbi.nlm.nih.gov/pubmed/36410214
Okubanjo, S.S., S.J. Brooke, R. Ward, N. Mostert, et al.
The use of confocal Raman microscopy and microfluidic channels to monitor the location and mobility of β-carotene incorporated in droplet-stabilized oil-in-water emulsions. Current Research in Food Science, 2023. 6: p. 100515. https://dx.doi.org/10.1016/j.crfs.2023.100515
Nguyen, T.T., P. Zhang, J. Bi, N.H. Nguyen, et al.
Silver─Gallium Nano-Amalgamated Particles as a Novel, Biocompatible Solution for Antibacterial Coatings. Advanced Functional Materials, 2023. n/a(n/a): p. 2310539. https://dx.doi.org/10.1002/adfm.202310539
Nguyen, T.T., N.H. Nguyen, G.T. Pham, J. Vongsvivut, et al.
Synchrotron macro ATR-FTIR micro-spectroscopy to unlock silver ion-induced biochemical alterations in bacteria. Materials Advances, 2023. 4(23): p. 6342–6352. http://dx.doi.org/10.1039/D3MA00598D
Milewska, A., G. Baekelandt, S. Boutaieb, V. Mozin, et al.
In-line monitoring of protein concentration with MIR spectroscopy during UFDF. Eng Life Sci, 2023. 23(2): p. e2200050. https://www.ncbi.nlm.nih.gov/pubmed/36751473
Kujdowicz, M., D. Perez-Guaita, P. Chlosta, K. Okon, et al.
Evaluation of grade and invasiveness of bladder urothelial carcinoma using infrared imaging and machine learning. Analyst, 2023. 148(2): p. 278–285. https://www.ncbi.nlm.nih.gov/pubmed/36525038
Kujdowicz, M., D. Perez-Guaita, P. Chlosta, K. Okon, et al.
Fourier transform IR imaging of primary tumors predicts lymph node metastasis of bladder carcinoma. Biochim Biophys Acta Mol Basis Dis, 2023. 1869(8): p. 166840. https://www.ncbi.nlm.nih.gov/pubmed/37558006
Konkol, J.A. and G. Tsilomelekis
Porchlight: An Accessible and Interactive Aid in Preprocessing of Spectral Data. Journal of Chemical Education, 2023. 100(3): p. 1326–1332. https://dx.doi.org/10.1021/acs.jchemed.2c00812
Kim, W., Y. Wang, J. Vongsvivut, Q. Ye, et al.
On surface composition and stability of beta-carotene microcapsules comprising pea/whey protein complexes by synchrotron-FTIR microspectroscopy. Food Chem, 2023. 426: p. 136565. https://www.ncbi.nlm.nih.gov/pubmed/37302310
Kazimierczak, P., G. Kalisz, A. Sroka-Bartnicka, and A. Przekora
Effectiveness of the production of tissue-engineered living bone graft: a comparative study using perfusion and rotating bioreactor systems. Sci Rep, 2023. 13(1): p. 13737. https://www.ncbi.nlm.nih.gov/pubmed/37612367
Kaminska, K., E. Wiercigroch, K. Malek, and M. Grzesiak
Biomolecular composition of porcine ovarian follicles following in vitro treatment of vitamin D(3) and insulin alone or in combination. Reprod Biol, 2023. 23(4): p. 100818. https://www.ncbi.nlm.nih.gov/pubmed/37862827
Hayles, A., R. Bright, N.H. Nguyen, V.K. Truong, et al.
Vancomycin tolerance of adherent Staphylococcus aureus is impeded by nanospike-induced physiological changes. NPJ Biofilms Microbiomes, 2023. 9(1): p. 90. https://www.ncbi.nlm.nih.gov/pubmed/38030708
Evans, C.W., A. Egid, S.S.A. Mamsa, D.J. Paterson, et al.
Elemental Mapping in a Preclinical Animal Model Reveals White Matter Copper Elevation in the Acute Phase of Central Nervous System Trauma. ACS Chem Neurosci, 2023. 14(18): p. 3518–3527. https://www.ncbi.nlm.nih.gov/pubmed/37695072
Buzalewicz, I., A. Ulatowska-Jarża, M. Gąsior-Głogowska, M. Wolf-Baca, et al.
New measurements modalities for multi-parametric, label-free and non-contact detection of biofilm formation on stainless steel and glass surfaces. Measurement, 2023. 210: p. 112588. https://dx.doi.org/10.1016/j.measurement.2023.112588
Bryant, S.J., Z.L. Shaw, L.Z.Y. Huang, A. Elbourne, et al.
Insights into Chemical Interactions and Related Toxicities of Deep Eutectic Solvents with Mammalian Cells Observed Using Synchrotron Macro–ATR–FTIR Microspectroscopy. Biophysica, 2023. 3(2): p. 318–334. https://dx.doi.org/10.3390/biophysica3020021
Augustyniak, K., A. Pragnaca, M. Lesniak, M. Halasa, et al.
Molecular tracking of interactions between progenitor and endothelial cells via Raman and FTIR spectroscopy imaging: a proof of concept of a new analytical strategy for in vitro research. Cell Mol Life Sci, 2023. 80(11): p. 329. https://www.ncbi.nlm.nih.gov/pubmed/37851174
Alghamdi, S.S., R. Balu, J. Vongsvivut, V.K. Truong, et al.
Exploring the Role of Compatibilizers in Modulating the Interfacial Phenomena and Improving the Properties of Cork–Nylon Composites. ACS Applied Polymer Materials, 2023. 5(9): p. 6990–7008. https://dx.doi.org/10.1021/acsapm.3c01049
Zancajo, V.M.R., S. Diehn, R. Elbaum, and J. Kneipp
Multimodal Imaging of Silicified Sorghum Leaves. Analysis & Sensing, 2022. 2(5): p. e202200006. https://doi.org/10.1002/anse.202200006
Yin, J., G. Huang, C. An, and R. Feng
Nanocellulose enhances the dispersion and toxicity of ZnO NPs to green algae Eremosphaera viridis. Environmental Science: Nano, 2022. 9(1): p. 393–405. http://dx.doi.org/10.1039/D1EN00881A
Tosta, M.R., L.L. Prates, X. Feng, M.E. Rodriguez-Espinosa, et al.
Research progress in structural and nutritional characterization and technologically processing impact on cool-season adapted oat and barley cereal kernels with wet chemistry and advanced vibrational molecular spectroscopy. Crit Rev Food Sci Nutr, 2022. 62(19): p. 5130–5139. https://www.ncbi.nlm.nih.gov/pubmed/33612010
Sommer, F., B. Sun, J. Fischer, M. Goldammer, et al.
Hyperspectral Imaging during Normothermic Machine Perfusion-A Functional Classification of Ex Vivo Kidneys Based on Convolutional Neural Networks. Biomedicines, 2022. 10(2). https://www.ncbi.nlm.nih.gov/pubmed/35203605
Siriwong, S., W. Tanthanuch, D. Srisamut, C. Chantarakhon, et al.
Performance Evaluation of Focal Plane Array (FPA)-FTIR and Synchrotron Radiation (SR)-FTIR Microspectroscopy to Classify Rice Components. Microsc Microanal, 2022: p. 1–10. https://www.ncbi.nlm.nih.gov/pubmed/36062386
Shaw, Z.L., S. Cheeseman, L.Z.Y. Huang, R. Penman, et al.
Illuminating the biochemical interaction of antimicrobial few-layer black phosphorus with microbial cells using synchrotron macro-ATR-FTIR. J Mater Chem B, 2022. https://www.ncbi.nlm.nih.gov/pubmed/35024716
Seredin, P., D. Goloshchapov, A. Emelyanova, N. Buylov, et al.
Engineering of biomimetic mineralized layer formed on the surface of natural dental enamel. Results in Engineering, 2022. 15: p. 100583. https://dx.doi.org/10.1016/j.rineng.2022.100583
Schirer, A., Y. El Khoury, C. Patte-Mensah, C. Klein, et al.
Raman and infrared microscopic study on the lipid redistribution in Alzheimer diseased murine tissue. Asian Journal of Physics, 2022. 31(2): p. 259–264. https://hal.science/hal-03752544
Muller, K., Z. Szikszai, A. Csepregi, R. Huszank, et al.
Proton beam irradiation induces invisible modifications under the surface of painted parchment. Sci Rep, 2022. 12(1): p. 113. https://www.ncbi.nlm.nih.gov/pubmed/34996914
Molee, W., W. Khosinklang, P. Tongduang, K. Thumanu, et al.
Biomolecules, Fatty Acids, Meat Quality, and Growth Performance of Slow-Growing Chickens in an Organic Raising System. Animals (Basel), 2022. 12(5). https://www.ncbi.nlm.nih.gov/pubmed/35268139
Liu, Y.J., M. Kyne, S. Wang, S. Wang, et al.
A User-Friendly Platform for Single-Cell Raman Spectroscopy Analysis. Spectrochim Acta A Mol Biomol Spectrosc, 2022. 282: p. 121686. https://www.ncbi.nlm.nih.gov/pubmed/35921751
Liu, X., L. Shi, L. Shi, M. Wei, et al.
Towards Mapping Mouse Metabolic Tissue Atlas by Mid-Infrared Imaging with Heavy Water Labeling. Adv Sci (Weinh), 2022: p. e2105437. https://www.ncbi.nlm.nih.gov/pubmed/35319171
Licini, C., V. Notarstefano, S. Marchi, G. Cerqueni, et al.
Altered type I collagen networking in osteoporotic human femoral head revealed by histomorphometric and Fourier transform infrared imaging correlated analyses. Biofactors, 2022. 48(5): p. 1089–1110. https://www.ncbi.nlm.nih.gov/pubmed/35661288
Leng, W., S. He, B. Lu, R. Thirumalai, et al.
Raman imaging: An indispensable technique to comprehend the functionalization of lignocellulosic material. Int J Biol Macromol, 2022. 220: p. 159–174. https://www.ncbi.nlm.nih.gov/pubmed/35981669
Lam, V., J. Phillips, E. Harrild, R.J. Tidy, et al.
Association between ageing, brain chemistry and white matter volume revealed with complementary MRI and FTIR brain imaging. Analyst, 2022. 147(23): p. 5274–5282. https://www.ncbi.nlm.nih.gov/pubmed/36346247
Krysa, M., A. Makuch-Kocka, K. Susniak, T. Plech, et al.
Spectroscopic Evaluation of the Potential Neurotoxic Effects of a New Candidate for Anti-Seizure Medication—TP-315 during Chronic Administration (In Vivo). International Journal of Molecular Sciences, 2022. 23(9): p. 4607. https://dx.doi.org/doi:10.3390/ijms23094607
Kranz, S., M. Heyder, S. Mueller, A. Guellmar, et al.
Remineralization of Artificially Demineralized Human Enamel and Dentin Samples by Zinc-Carbonate Hydroxyapatite Nanocrystals. Materials (Basel), 2022. 15(20). https://www.ncbi.nlm.nih.gov/pubmed/36295240
Kolodziej, M., E. Kaznowska, S. Paszek, J. Cebulski, et al.
Characterisation of breast cancer molecular signature and treatment assessment with vibrational spectroscopy and chemometric approach. PLoS One, 2022. 17(3): p. e0264347. https://www.ncbi.nlm.nih.gov/pubmed/35263369
Koch, S.M., M. Pillon, T. Keplinger, C.H. Dreimol, et al.
Intercellular Matrix Infiltration Improves the Wet Strength of Delignified Wood Composites. ACS Appl Mater Interfaces, 2022. 14(27): p. 31216–31224. https://www.ncbi.nlm.nih.gov/pubmed/35767702
Keung, C., P. Heraud, N. Kuk, R. Lim, et al.
Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation. Int J Mol Sci, 2022. 23(5). https://www.ncbi.nlm.nih.gov/pubmed/35269993
Kamran, M.A., A. Alshahrani, A.A. Alnazeh, S.E. Udeabor, et al.
Ultrastructural and physicochemical characterization of pH receptive chlorhexidine-loaded poly-L-glycolic acid-modified orthodontic adhesive. Microsc Res Tech, 2022. 85(3): p. 996–1004. https://www.ncbi.nlm.nih.gov/pubmed/34716725
Hossain, M.T., S. Liyanage, and N. Abidi
FTIR microspectroscopic approach to investigate macromolecular distribution in seed coat cross-sections. Vibrational Spectroscopy, 2022. 120: p. 103376. https://dx.doi.org/10.1016/j.vibspec.2022.103376
Furber, K.L., R.J.S. Lacombe, S. Caine, M.P. Thangaraj, et al.
Biochemical Alterations in White Matter Tracts of the Aging Mouse Brain Revealed by FTIR Spectroscopy Imaging. Neurochem Res, 2022. 47(3): p. 795–810. https://www.ncbi.nlm.nih.gov/pubmed/34820737
Ellison, G., L. Duong, A. Hollings, D. Howard, et al.
Characterising murine hippocampal iron homeostasis, in relation to markers of brain inflammation and metabolism, during ageing. Metallomics, 2022. 14(10). https://www.ncbi.nlm.nih.gov/pubmed/36066906
Dreimol, C.H., H. Guo, M. Ritter, T. Keplinger, et al.
Sustainable wood electronics by iron-catalyzed laser-induced graphitization for large-scale applications. Nat Commun, 2022. 13(1): p. 3680. https://www.ncbi.nlm.nih.gov/pubmed/35760793
Chen, X., Y. Liu, G. Huang, C. An, et al.
Functional flax fiber with UV-induced switchable wettability for multipurpose oil-water separation. Frontiers of Environmental Science & Engineering, 2022. 16(12): p. 153. https://dx.doi.org/10.1007/s11783-022-1588-6
Chae, B., E. Seo, H.J. Kim, J. Kim, et al.
Spectrochemical analysis of slippery loach skin and kelp using FTIR imaging. Vibrational Spectroscopy, 2022. 118: p. 103338. https://dx.doi.org/10.1016/j.vibspec.2022.103338
Castro, P., S. C., and D. Zezell
Burn wound healing by infrared spectroscopy imaging: a Pilot study. 12th International Conference on Clinical Spectroscopy, 2022. http://repositorio.ipen.br/handle/123456789/33937
Boseley, R.E., J. Vongsvivut, D. Appadoo, M.J. Hackett, et al.
Monitoring the chemical changes in fingermark residue over time using synchrotron infrared spectroscopy. Analyst, 2022. 147(5): p. 799–810. https://www.ncbi.nlm.nih.gov/pubmed/35174821
Belloni, A., M. Furlani, S. Greco, V. Notarstefano, et al.
Uterine leiomyoma as useful model to unveil morphometric and macromolecular collagen state and impairment in fibrotic diseases: An ex-vivo human study. Biochim Biophys Acta Mol Basis Dis, 2022. 1868(12): p. 166494. https://www.ncbi.nlm.nih.gov/pubmed/35850176
Beć, K.B., J. Grabska, and C.W. Huck
Chapter 26 - Infrared and near-infrared spectroscopic techniques for the quality control of herbal medicines. Evidence-Based Validation of Herbal Medicine (Second Edition), 2022: p. 603–627. https://dx.doi.org/10.1016/B978-0-323-85542-6.00018-4
Augustyniak, K., K. Chrabaszcz, M. Smeda, M. Stojak, et al.
High-Resolution Fourier Transform Infrared (FT-IR) Spectroscopic Imaging for Detection of Lung Structures and Cancer-Related Abnormalities in a Murine Model. Appl Spectrosc, 2022. 76(4): p. 439–450. https://www.ncbi.nlm.nih.gov/pubmed/34076540
Ahn, T., M. Jueckstock, G.S. Mandair, J. Henderson, et al.
Matrix/mineral ratio and domain size variation with bone tissue age: A photothermal infrared study. J Struct Biol, 2022. 214(3): p. 107878. https://www.ncbi.nlm.nih.gov/pubmed/35781024
Yin, J., G. Huang, C. An, P. Zhang, et al.
Exploration of nanocellulose washing agent for the green remediation of phenanthrene-contaminated soil. J Hazard Mater, 2021. 403: p. 123861. https://www.ncbi.nlm.nih.gov/pubmed/33264936
Willenbacher, E., A. Brunner, B. Zelger, S.H. Unterberger, et al.
Application of mid-infrared microscopic imaging for the diagnosis and classification of human lymphomas. J Biophotonics, 2021. 14(9): p. e202100079. https://www.ncbi.nlm.nih.gov/pubmed/34159739
Vahabisani, A., C. An, X. Xin, E. Owens, et al.
Exploring the effects of microalgal biomass on the oil behavior in a sand-water system. Environ Sci Pollut Res Int, 2021. https://www.ncbi.nlm.nih.gov/pubmed/33638067
Traynor, D., I. Behl, D. O'Dea, F. Bonnier, et al.
Raman spectral cytopathology for cancer diagnostic applications. Nat Protoc, 2021. 16(7): p. 3716–3735. https://www.ncbi.nlm.nih.gov/pubmed/34117476
Swietlicka, I., S. Muszynski, C. Prein, H. Clausen-Schaumann, et al.
Fourier Transform Infrared Microspectroscopy Combined with Principal Component Analysis and Artificial Neural Networks for the Study of the Effect of beta-Hydroxy-beta-Methylbutyrate (HMB) Supplementation on Articular Cartilage. Int J Mol Sci, 2021. 22(17). https://www.ncbi.nlm.nih.gov/pubmed/34502096
Siriwong, S., W. Thepbandit, N.H. Hoang, N.K. Papathoti, et al.
Identification of a Chitooligosaccharide Mechanism against Bacterial Leaf Blight on Rice by In Vitro and In Silico Studies. Int J Mol Sci, 2021. 22(15). https://www.ncbi.nlm.nih.gov/pubmed/34360756
Sangpueak, R., P. Phansak, K. Thumanu, S. Siriwong, et al.
Effect of Salicylic AcidFormulations on Induced Plant Defense against Cassava Anthracnose Disease. Plant Pathol J, 2021. 37(4): p. 356–364. https://www.ncbi.nlm.nih.gov/pubmed/34365747
Saadaldin, S., A. Aldegheishem, E. Eldwakhly, M.S. Mostafa, et al.
Riboflavin mediated photo-illumination for bonding zirconia to tooth structure. Materials Technology, 2021: p. 1–12. https://dx.doi.org/10.1080/10667857.2021.1982472
Quintas, G., B.R. Wood, H.J. Byrne, and D. Perez-Guaita
Multiplexed Fourier Transform Infrared and Raman Imaging. Methods Mol Biol, 2021. 2350: p. 299–312. https://www.ncbi.nlm.nih.gov/pubmed/34331293
Phansak, P., S. Siriwong, R. Sangpueak, N. Kanawapee, et al.
Screening rice blast-resistant cultivars via synchrotron fourier transform infrared (SR-FTIR) microspectroscopy. Emirates Journal of Food and Agriculture, 2021. 33(9): p. 726–741. https://dx.doi.org/10.9755/ejfa.2021.v33.i9.2758
Petrov, G.I., R. Arora, and V.V. Yakovlev
Coherent anti-Stokes Raman scattering imaging of microcalcifications associated with breast cancer. Analyst, 2021. 146(4): p. 1253–1259. https://www.ncbi.nlm.nih.gov/pubmed/33332488
Mosca, S., C. Conti, N. Stone, and P. Matousek
Spatially offset Raman spectroscopy. Nature Reviews Methods Primers, 2021. 1(1): p. 21. https://dx.doi.org/10.1038/s43586-021-00019-0
Matuszyk, E. and M. Baranska
Primary murine hepatocytes exposed to fatty acids analyzed by Raman and infrared microscopy. Clinical Spectroscopy, 2021. 3: p. 100007. https://dx.doi.org/10.1016/j.clispe.2021.100007
Liu, S., D.J. Hall, C.J. Della Valle, M.J. Walsh, et al.
Simultaneous Characterization of Implant Wear and Tribocorrosion Debris within Its Corresponding Tissue Response Using Infrared Chemical Imaging. Biotribology (Oxf), 2021. 26. https://www.ncbi.nlm.nih.gov/pubmed/33829077
Liedtke, I., S. Diehn, Z. Heiner, S. Seifert, et al.
Multivariate Raman mapping for phenotypic characterization in plant tissue sections. Spectrochim Acta A Mol Biomol Spectrosc, 2021. 251: p. 119418. https://www.ncbi.nlm.nih.gov/pubmed/33461131
Kujdowicz, M., B. Mech, K. Chrabaszcz, P. Chlosta, et al.
FTIR Spectroscopic Imaging Supports Urine Cytology for Classification of Low- and High-Grade Bladder Carcinoma. Cancers (Basel), 2021. 13(22). https://www.ncbi.nlm.nih.gov/pubmed/34830887
Kidman, C.J., C.D.S. Mamotte, M.A. Eynaud, J. Reinhardt, et al.
Tracking biochemical changes induced by iron loading in AML12 cells with synchrotron live cell, time-lapse infrared microscopy. Biochem J, 2021. 478(6): p. 1227–1239. https://www.ncbi.nlm.nih.gov/pubmed/33616158
Kamran, M.A., A. A Alnazeh, M.S. Hameed, S.M. Yassin, et al.
pH-receptive chlorhexidine-loaded poly-L-glycolic acid platform delivery approach to stabilize adhesive-orthodontic interface. Polymer Composites, 2021. 42(10): p. 5564–5573. https://dx.doi.org/10.1002/pc.26247
Kalisz, G., B. Gieroba, O. Chrobak, M. Suchora, et al.
Vibrational Spectroscopic Analyses and Imaging of the Early Middle Ages Hemp Bast Fibres Recovered from Lake Sediments. Molecules, 2021. 26(5). https://www.ncbi.nlm.nih.gov/pubmed/33804535
Hartnell, D., A. Hollings, A.M. Ranieri, H.B. Lamichhane, et al.
Mapping sub-cellular protein aggregates and lipid inclusions using synchrotron ATR-FTIR microspectroscopy. Analyst, 2021. https://www.ncbi.nlm.nih.gov/pubmed/33881057
Gieroba, B., A. Przekora, G. Kalisz, P. Kazimierczak, et al.
Collagen maturity and mineralization in mesenchymal stem cells cultured on the hydroxyapatite-based bone scaffold analyzed by ATR-FTIR spectroscopic imaging. Mater Sci Eng C Mater Biol Appl, 2021. 119: p. 111634. https://www.ncbi.nlm.nih.gov/pubmed/33321672
Fávaro, W.J., H.J. Ceragioli, A. Villela R, and N. Duran
Fourier Transform Infrared Spectroscopy as diagnostic tools for bladder cancer treatment: Doxorubicin and Cisplatin and Reduced Graphene Oxide as nanocarrier. Nanomedicine Research Journal, 2021. 6(3): p. 228–236.
Das Gupta, S., M. Killenberger, T. Tanner, L. Rieppo, et al.
Mineralization of dental tissues and caries lesions detailed with Raman microspectroscopic imaging. Analyst, 2021. 146(5): p. 1705–1713. https://www.ncbi.nlm.nih.gov/pubmed/33295890
Chen, Z., C. An, J. Yin, E. Owens, et al.
Exploring the use of cellulose nanocrystal as surface-washing agent for oiled shoreline cleanup. J Hazard Mater, 2021. 402: p. 123464. https://www.ncbi.nlm.nih.gov/pubmed/32693337
Cheeseman, S., Z.L. Shaw, J. Vongsvivut, R.J. Crawford, et al.
Analysis of Pathogenic Bacterial and Yeast Biofilms Using the Combination of Synchrotron ATR-FTIR Microspectroscopy and Chemometric Approaches. Molecules, 2021. 26(13). https://www.ncbi.nlm.nih.gov/pubmed/34202224
Alamu, E.O., E. Nuwamanya, D. Cornet, K. Meghar, et al.
Near-infrared spectroscopy applications for high-throughput phenotyping for cassava and yam: A review. Int J Food Sci Technol, 2021. 56(3): p. 1491–1501. https://www.ncbi.nlm.nih.gov/pubmed/33776247
Akram, Z., S. Aati, H. Ngo, and A. Fawzy
pH-dependent delivery of chlorhexidine from PGA grafted mesoporous silica nanoparticles at resin-dentin interface. J Nanobiotechnology, 2021. 19(1): p. 43. https://www.ncbi.nlm.nih.gov/pubmed/33563280
Abidi, N.
Sample Preparation, Data Acquisition, Spectral Data Processing and Analysis. FTIR Microspectroscopy : Selected Emerging Applications, 2021: p. 125–128. https://dx.doi.org/10.1007/978-3-030-84426-4_8
Woss, C., S.H. Unterberger, G. Degenhart, A. Akolkar, et al.
Comparison of structure and composition of a fossil Champsosaurus vertebra with modern Crocodylidae vertebrae: A multi-instrumental approach. J Mech Behav Biomed Mater, 2020. 104: p. 103668. https://www.ncbi.nlm.nih.gov/pubmed/32174426
Sunthornvarabhas, J., P. Rungthaworn, U. Sukatta, N. Juntratip, et al.
Antimicrobial Tendency of Bagasse Lignin Extracts by Raman Peak Intensity. Sugar Tech, 2020. 22(4): p. 697–705. https://dx.doi.org/10.1007/s12355-019-00778-x
Shi, L., X. Liu, L. Shi, H.T. Stinson, et al.
Mid-infrared metabolic imaging with vibrational probes. Nat Methods, 2020. 17(8): p. 844–851. https://www.ncbi.nlm.nih.gov/pubmed/32601425
S., L., H. D., M. S., C. S., et al.
Characterization Of Wear And Corrosion Product Using Multivariate Fourier-Transform Infrared Microspectroscopy Imaging Analysis. Orthopaedic Proceedings, 2020. 102-B(SUPP_1): p. 103–103. https://dx.doi.org/10.1302/1358-992X.2020.1.103
Puttaso, P., W. Namanusart, K. Thumanu, B. Kamolmanit, et al.
Assessing the Effect of Rubber (Hevea brasiliensis (Willd. ex A. Juss.) Muell. Arg.) Leaf Chemical Composition on Some Soil Properties of Differently Aged Rubber Tree Plantations. Agronomy, 2020. 10(12): p. 1871. https://dx.doi.org/10.3390/agronomy10121871
Ong, L., A.P. Pax, A. Ong, J. Vongsvivut, et al.
The effect of pH on the fat and protein within cream cheese and their influence on textural and rheological properties. Food Chem, 2020. 332: p. 127327. https://www.ncbi.nlm.nih.gov/pubmed/32615380
McGann, J., M. Willans, G. Sauzier, M.J. Hackett, et al.
Investigating diversity in polymer-based identity cards using ATR-FTIR spectroscopy and chemometrics. Forensic Science International: Reports, 2020. 2: p. 100149. https://dx.doi.org/10.1016/j.fsir.2020.100149
Mazarakis, N., J. Vongsvivut, K.R. Bambery, K. Ververis, et al.
Investigation of molecular mechanisms of experimental compounds in murine models of chronic allergic airways disease using synchrotron Fourier-transform infrared microspectroscopy. Sci Rep, 2020. 10(1): p. 11713. https://www.ncbi.nlm.nih.gov/pubmed/32678217
Liu, Y.J., M. Kyne, C. Wang, and X.Y. Yu
Data mining in Raman imaging in a cellular biological system. Comput Struct Biotechnol J, 2020. 18: p. 2920–2930. https://www.ncbi.nlm.nih.gov/pubmed/33163152
Liu, Y., G. Huang, C. An, X. Chen, et al.
Use of Nano-TiO2 self-assembled flax fiber as a new initiative for immiscible oil/water separation. Journal of Cleaner Production, 2020. 249: p. 119352. https://dx.doi.org/10.1016/j.jclepro.2019.119352
Liu, S., D.J. Hall, S.M. McCarthy, J.J. Jacobs, et al.
Fourier transform infrared spectroscopic imaging of wear and corrosion products within joint capsule tissue from total hip replacements patients. J Biomed Mater Res B Appl Biomater, 2020. 108(2): p. 513–526. https://www.ncbi.nlm.nih.gov/pubmed/31099981
Gieroba, B., M. Krysa, K. Wojtowicz, A. Wiater, et al.
The FT-IR and Raman Spectroscopies as Tools for Biofilm Characterization Created by Cariogenic Streptococci. Int J Mol Sci, 2020. 21(11). https://www.ncbi.nlm.nih.gov/pubmed/32471277
Drozdz, A., K. Matusiak, Z. Setkowicz, M. Ciarach, et al.
FTIR microspectroscopy revealed biochemical changes in liver and kidneys as a result of exposure to low dose of iron oxide nanoparticles. Spectrochim Acta A Mol Biomol Spectrosc, 2020. 236: p. 118355. https://www.ncbi.nlm.nih.gov/pubmed/32344375
Das Gupta, S., M.A.J. Finnila, S.S. Karhula, S. Kauppinen, et al.
Raman microspectroscopic analysis of the tissue-specific composition of the human osteochondral junction in osteoarthritis: A pilot study. Acta Biomater, 2020. 106: p. 145–155. https://www.ncbi.nlm.nih.gov/pubmed/32081781
Chatchawal, P., M. Wongwattanakul, P. Tippayawat, N. Jearanaikoon, et al.
Monitoring the Progression of Liver Fluke-Induced Cholangiocarcinoma in a Hamster Model Using Synchrotron FTIR Microspectroscopy and Focal Plane Array Infrared Imaging. Anal Chem, 2020. https://www.ncbi.nlm.nih.gov/pubmed/33170647
Bik, E., M. Ishigaki, A. Blat, A. Jasztal, et al.
Lipid Droplet Composition Varies Based on Medaka Fish Eggs Development as Revealed by NIR-, MIR-, and Raman Imaging. Molecules, 2020. 25(4). https://www.ncbi.nlm.nih.gov/pubmed/32070018
Adobes-Vidal, M., M. Frey, and T. Keplinger
Atomic force microscopy imaging of delignified secondary cell walls in liquid conditions facilitates interpretation of wood ultrastructure. J Struct Biol, 2020. 211(2): p. 107532. https://www.ncbi.nlm.nih.gov/pubmed/32442716
Zhou, X.J., H.C. Zhu, J.J. Zhong, W.W. Peng, et al.
New status of the infrared beamlines at SSRF. Nuclear Science and Techniques, 2019. 30(12): p. 182. https://dx.doi.org/10.1007/s41365-019-0696-x
Wrobel, T.P., P. Koziol, M.K. Raczkowska, D. Liberda, et al.
Noise-free simulation of an FT-IR imaging hyperspectral dataset of pancreatic biopsy core bound by experiment. Sci Data, 2019. 6(1): p. 239. https://www.ncbi.nlm.nih.gov/pubmed/31664041
Vongsvivut, J., D. Perez-Guaita, B.R. Wood, P. Heraud, et al.
Synchrotron macro ATR-FTIR microspectroscopy for high-resolution chemical mapping of single cells. Analyst, 2019. 144(10): p. 3226–3238. https://www.ncbi.nlm.nih.gov/pubmed/30869675
Vidiella del Blanco, M., V. Gomez, P. Fleckenstein, T. Keplinger, et al.
Grafting of amphiphilic block copolymers on lignocellulosic materials via SI-AGET-ATRP. Journal of Polymer Science Part A: Polymer Chemistry, 2019. 57(8): p. 885–897. https://dx.doi.org/10.1002/pola.29340
Segmehl, J.S., T. Keplinger, A. Krasnobaev, J.K. Berg, et al.
Facilitated delignification in CAD deficient transgenic poplar studied by confocal Raman spectroscopy imaging. Spectrochim Acta A Mol Biomol Spectrosc, 2019. 206: p. 177–184. https://www.ncbi.nlm.nih.gov/pubmed/30099316
Pax, A.P., L. Ong, J. Vongsvivut, M.J. Tobin, et al.
The characterisation of Mozzarella cheese microstructure using high resolution synchrotron transmission and ATR-FTIR microspectroscopy. Food Chem, 2019. 291: p. 214–222. https://www.ncbi.nlm.nih.gov/pubmed/31006461
Milewska, A., V. Zivanovic, V. Merk, U.B. Arnalds, et al.
Gold nanoisland substrates for SERS characterization of cultured cells. Biomed Opt Express, 2019. 10(12): p. 6172–6188. https://www.ncbi.nlm.nih.gov/pubmed/31853393
Kolodziej, M., D. Jesionek-Kupnicka, M. Braun, V. Atamaniuk, et al.
Classification of aggressive and classic mantle cell lymphomas using synchrotron Fourier Transform Infrared microspectroscopy. Sci Rep, 2019. 9(1): p. 12857. https://www.ncbi.nlm.nih.gov/pubmed/31492883
Kansal, V., J. Lukenchuk, M.M. U Dodd, M. Hackett, et al.
Analysis of the Change Induced by Riboflavin and Ultraviolet Light on Corneal Collagen by Infrared Spectrometry. International Journal of Keratoconus and Ectatic Corneal Diseases, 2019. 8(17-22). https://dx.doi.org/10.5005/jp-journals-10025-1174
Augustyniak, K., K. Chrabaszcz, A. Jasztal, M. Smeda, et al.
High and ultra-high definition of infrared spectral histopathology gives an insight into chemical environment of lung metastases in breast cancer. J Biophotonics, 2019. 12(4): p. e201800345. https://www.ncbi.nlm.nih.gov/pubmed/30548409
Zhang, N.
Microstructures, rheological and mechanical properties of gelatin–starch blends. RMIT University, 2018. PhD Thesis. https://doi.org/10.25439/rmt.27582384
Zeise, I., Z. Heiner, S. Holz, M. Joester, et al.
Raman Imaging of Plant Cell Walls in Sections of Cucumis sativus. Plants (Basel), 2018. 7(1). https://www.ncbi.nlm.nih.gov/pubmed/29370089
Yarbakht, M., M. Nikkhah, A. Moshaii, K. Weber, et al.
Simultaneous isolation and detection of single breast cancer cells using surface-enhanced Raman spectroscopy. Talanta, 2018. 186: p. 44–52. https://www.ncbi.nlm.nih.gov/pubmed/29784385
Vitas, S., T. Keplinger, N. Reichholf, R. Figi, et al.
Functional lignocellulosic material for the remediation of copper(II) ions from water: Towards the design of a wood filter. J Hazard Mater, 2018. 355: p. 119–127. https://www.ncbi.nlm.nih.gov/pubmed/29778028
Truong, V.K., J. Vongsvivut, N.M. Geeganagamage, M.J. Tobin, et al.
Study of melanin localization in the mature male Calopteryx haemorrhoidalis damselfly wings. J Synchrotron Radiat, 2018. 25(Pt 3): p. 874–877. https://www.ncbi.nlm.nih.gov/pubmed/29714199
Stuhr, S., V.K. Truong, J. Vongsvivut, T. Senkbeil, et al.
Structure and Chemical Organization in Damselfly Calopteryx haemorrhoidalis Wings: A Spatially Resolved FTIR and XRF Analysis with Synchrotron Radiation. Sci Rep, 2018. 8(1): p. 8413. https://www.ncbi.nlm.nih.gov/pubmed/29849036
Prats-Mateu, B., M. Felhofer, A. de Juan, and N. Gierlinger
Multivariate unmixing approaches on Raman images of plant cell walls: new insights or overinterpretation of results? Plant Methods, 2018. 14: p. 52. https://www.ncbi.nlm.nih.gov/pubmed/29997681
Ozparpucu, M., N. Gierlinger, I. Burgert, R. Van Acker, et al.
The effect of altered lignin composition on mechanical properties of CINNAMYL ALCOHOL DEHYDROGENASE (CAD) deficient poplars. Planta, 2018. 247(4): p. 887–897. https://www.ncbi.nlm.nih.gov/pubmed/29270675
Lima, C., L. Correa, H. Byrne, and d. Zezell
K-means and Hierarchical Cluster Analysis as segmentation algorithms of FTIR hyperspectral images collected from cutaneous tissue. 2018 SBFoton International Optics and Photonics Conference (SBFoton IOPC), 2018: p. 1–4. https://dx.doi.org/10.1109/SBFoton-IOPC.2018.8610920
Lasch, P., M. Stammler, M. Zhang, M. Baranska, et al.
FT-IR Hyperspectral Imaging and Artificial Neural Network Analysis for Identification of Pathogenic Bacteria. Anal Chem, 2018. 90(15): p. 8896–8904. https://www.ncbi.nlm.nih.gov/pubmed/29944341
Heiner, Z., I. Zeise, R. Elbaum, and J. Kneipp
Insight into plant cell wall chemistry and structure by combination of multiphoton microscopy with Raman imaging. J Biophotonics, 2018. 11(4): p. e201700164. https://www.ncbi.nlm.nih.gov/pubmed/29024576
Fiedler, I.A.K., M. Casanova, T. Keplinger, B. Busse, et al.
Effect of short-term formaldehyde fixation on Raman spectral parameters of bone quality. J Biomed Opt, 2018. 23(11): p. 1–6. https://www.ncbi.nlm.nih.gov/pubmed/30499261
Dorakumbura, B.N., R.E. Boseley, T. Becker, D.E. Martin, et al.
Revealing the spatial distribution of chemical species within latent fingermarks using vibrational spectroscopy. Analyst, 2018. 143(17): p. 4027–4039. https://www.ncbi.nlm.nih.gov/pubmed/29956693
Zhang, Y., G. Huang, C. An, X. Xin, et al.
Transport of anionic azo dyes from aqueous solution to gemini surfactant-modified wheat bran: Synchrotron infrared, molecular interaction and adsorption studies. Sci Total Environ, 2017. 595: p. 723–732. https://www.ncbi.nlm.nih.gov/pubmed/28407589
Ye, D., P. Heraud, R. Parnpai, and T. Li
Reversal of Experimental Liver Damage after Transplantation of Stem-Derived Cells Detected by FTIR Spectroscopy. Stem Cells Int, 2017. 2017: p. 4585169. https://www.ncbi.nlm.nih.gov/pubmed/29445403
Woess, C., S.H. Unterberger, C. Roider, M. Ritsch-Marte, et al.
Assessing various Infrared (IR) microscopic imaging techniques for post-mortem interval evaluation of human skeletal remains. PLoS One, 2017. 12(3): p. e0174552. http://www.ncbi.nlm.nih.gov/pubmed/28334006
Williamson, M.R., K. Dietrich, M.J. Hackett, S. Caine, et al.
Rehabilitation Augments Hematoma Clearance and Attenuates Oxidative Injury and Ion Dyshomeostasis After Brain Hemorrhage. Stroke, 2017. 48(1): p. 195–203. https://www.ncbi.nlm.nih.gov/pubmed/27899761
Thumanu, K., D. Wongchalee, M. Sompong, P. Phansak, et al.
Synchrotron-based FTIR microspectroscopy of chili resistance induced by Bacillus subtilis strain D604 against anthracnose disease. Journal of Plant Interactions, 2017. 12(1): p. 255–263. https://dx.doi.org/10.1080/17429145.2017.1325523
Sunthornvarabhas, J., S. Liengprayoon, and T. Suwonsichon
Antimicrobial kinetic activities of lignin from sugarcane bagasse for textile product. Industrial Crops and Products, 2017. 109: p. 857–861. https://dx.doi.org/10.1016/j.indcrop.2017.09.059
Smith, G.P.S., S.E. Holroyd, D.C.W. Reid, and K.C. Gordon
Raman imaging processed cheese and its components. Journal of Raman Spectroscopy, 2017. 48(3): p. 374–383. https://dx.doi.org/10.1002/jrs.5054
Pallua, J.D., S. Unterberger, N. Pemberger, C. Woess, et al.
Retrospective case study on the suitability of mid-infrared microscopic imaging for the diagnosis of mucormycosis in human tissue sections. Analytical Methods, 2017. 9(28): p. 4135–4142. https://dx.doi.org/10.1039/C7AY01132F
Lasch, P. and I. Noda
Two-Dimensional Correlation Spectroscopy for Multimodal Analysis of FT-IR, Raman, and MALDI-TOF MS Hyperspectral Images with Hamster Brain Tissue. Anal Chem, 2017. 89(9): p. 5008–5016. https://www.ncbi.nlm.nih.gov/pubmed/28365985
Kancharla, R., S. Karpurapu, V.R. Kumar, and G.P. Reddy
A Novel Approach for Analysis of FTIR Membrane Spectroscopy. 2017 IEEE 7th International Advance Computing Conference (IACC), 2017: p. 728–731. https://dx.doi.org/10.1109/IACC.2017.0151
Heiner, Z., M. Guhlke, V. Zivanovic, F. Madzharova, et al.
Surface-enhanced hyper Raman hyperspectral imaging and probing in animal cells. Nanoscale, 2017. 9(23): p. 8024–8032. https://www.ncbi.nlm.nih.gov/pubmed/28574069
Capobianco, G., M.P. Bracciale, D. Sali, F. Sbardella, et al.
Chemometrics approach to FT-IR hyperspectral imaging analysis of degradation products in artwork cross-section. Microchemical Journal, 2017. 132: p. 69–76. https://dx.doi.org/10.1016/j.microc.2017.01.007
Belt, T., T. Keplinger, T. Hänninen, and L. Rautkari
Cellular level distributions of Scots pine heartwood and knot heartwood extractives revealed by Raman spectroscopy imaging. Industrial Crops and Products, 2017. 108: p. 327–335. https://www.sciencedirect.com/science/article/pii/S0926669017304430
Amenabar, I., S. Poly, M. Goikoetxea, W. Nuansing, et al.
Hyperspectral infrared nanoimaging of organic samples based on Fourier transform infrared nanospectroscopy. Nat Commun, 2017. 8: p. 14402. https://www.ncbi.nlm.nih.gov/pubmed/28198384
Alaverdashvili, M., M.J. Hackett, S. Caine, and P.G. Paterson
Parallel changes in cortical neuron biochemistry and motor function in protein-energy malnourished adult rats. Neuroimage, 2017. 149: p. 275–284. https://www.ncbi.nlm.nih.gov/pubmed/28179168
Zawlik, I., E. Kaznowska, J. Cebulski, M. Kolodziej, et al.
FPA-FTIR Microspectroscopy for Monitoring Chemotherapy Efficacy in Triple-Negative Breast Cancer. Sci Rep, 2016. 6: p. 37333. http://www.ncbi.nlm.nih.gov/pubmed/27857183
Wrobel, T.P., J.T. Kwak, A. Kadjacsy-Balla, and R. Bhargava
High-definition Fourier transform infrared spectroscopic imaging of prostate tissue. SPIE Medical Imaging, 2016. 9791. https://dx.doi.org/10.1117/12.2217341
Tolstik, E., L.A. Osminkina, C. Matthaus, M. Burkhardt, et al.
Studies of silicon nanoparticles uptake and biodegradation in cancer cells by Raman spectroscopy. Nanomedicine, 2016. 12(7): p. 1931–1940. https://www.ncbi.nlm.nih.gov/pubmed/27085902
Sunthornvarabhas, J., S. Liengprayoon, C. Aouf, W. Rungjang, et al.
Tara tannin as active ingredient in electrospun fibrous delivery system. Journal of Applied Polymer Science, 2016. 133(27). https://dx.doi.org/10.1002/app.43646
Owocki, K., B. Kremer, B. Wrzosek, A. Krolikowska, et al.
Fungal Ferromanganese Mineralisation in Cretaceous Dinosaur Bones from the Gobi Desert, Mongolia. PLoS One, 2016. 11(2): p. e0146293. https://www.ncbi.nlm.nih.gov/pubmed/26863014
Oinas, J., L. Rieppo, M.A. Finnila, M. Valkealahti, et al.
Imaging of Osteoarthritic Human Articular Cartilage using Fourier Transform Infrared Microspectroscopy Combined with Multivariate and Univariate Analysis. Sci Rep, 2016. 6: p. 30008. https://www.ncbi.nlm.nih.gov/pubmed/27445254
Merk, V., M. Chanana, S. Gaan, and I. Burgert
Mineralization of wood by calcium carbonate insertion for improved flame retardancy. Holzforschung, 2016. 70(9): p. 867–876. https://dx.doi.org/10.1515/hf-2015-0228
Kumar, S., T. Verma, R. Mukherjee, F. Ariese, et al.
Raman and infra-red microspectroscopy: towards quantitative evaluation for clinical research by ratiometric analysis. Chem Soc Rev, 2016. 45(7): p. 1879–900. https://www.ncbi.nlm.nih.gov/pubmed/26497386
Kochan, K., K. Chrabaszcz, B. Szczur, E. Maslak, et al.
IR and Raman imaging of murine brains from control and ApoE/LDLR(-/-) mice with advanced atherosclerosis. Analyst, 2016. 141(18): p. 5329–38. http://www.ncbi.nlm.nih.gov/pubmed/27332112
Dudala, J., M.B. Bialas, M. Szczerbowska-Boruchowska, M. Bereza-Buziak, et al.
Investigation of biochemical composition of adrenal gland tumors by means of FTIR. Pol J Pathol, 2016. 67(1): p. 60–8. https://www.ncbi.nlm.nih.gov/pubmed/27179276
Caine, S., M.J. Hackett, H. Hou, S. Kumar, et al.
A novel multi-modal platform to image molecular and elemental alterations in ischemic stroke. Neurobiol Dis, 2016. 91: p. 132–42. https://www.ncbi.nlm.nih.gov/pubmed/26969531
Buchner, T., D. Drescher, V. Merk, H. Traub, et al.
Biomolecular environment, quantification, and intracellular interaction of multifunctional magnetic SERS nanoprobes. Analyst, 2016. 141(17): p. 5096–106. https://www.ncbi.nlm.nih.gov/pubmed/27353290
Zohdi, V., D.R. Whelan, B.R. Wood, J.T. Pearson, et al.
Importance of Tissue Preparation Methods in FTIR Micro-Spectroscopical Analysis of Biological Tissues: 'Traps for New Users'. PLoS One, 2015. 10(2): p. e0116491. http://www.ncbi.nlm.nih.gov/pubmed/25710811
Wrobel, T.P., K.M. Marzec, S. Chlopicki, E. Maslak, et al.
Effects of Low Carbohydrate High Protein (LCHP) diet on atherosclerotic plaque phenotype in ApoE/LDLR-/- mice: FT-IR and Raman imaging. Sci Rep, 2015. 5: p. 14002. https://www.ncbi.nlm.nih.gov/pubmed/26391802
Woess, C., M. Drach, A. Villunger, R. Tappert, et al.
Application of mid-infrared (MIR) microscopy imaging for discrimination between follicular hyperplasia and follicular lymphoma in transgenic mice. Analyst, 2015. 140(18): p. 6363–72. https://www.ncbi.nlm.nih.gov/pubmed/26236782
Tolstik, T., C. Marquardt, C. Beleites, C. Matthaus, et al.
Classification and prediction of HCC tissues by Raman imaging with identification of fatty acids as potential lipid biomarkers. J Cancer Res Clin Oncol, 2015. 141(3): p. 407–18. https://www.ncbi.nlm.nih.gov/pubmed/25238702
Thumanu, K., M. Sompong, P. Phansak, K. Nontapot, et al.
Use of infrared microspectroscopy to determine leaf biochemical composition of cassava in response to Bacillus subtilis CaSUT007. Journal of Plant Interactions, 2015. 10(1): p. 270–279. https://dx.doi.org/10.1080/17429145.2015.1059957
Sroka-Bartnicka, A., J.A. Kimber, L. Borkowski, M. Pawlowska, et al.
The biocompatibility of carbon hydroxyapatite/beta-glucan composite for bone tissue engineering studied with Raman and FTIR spectroscopic imaging. Anal Bioanal Chem, 2015. 407(25): p. 7775–85. https://www.ncbi.nlm.nih.gov/pubmed/26277184
Sreedhar, H., V.K. Varma, P.L. Nguyen, B. Davidson, et al.
High-definition Fourier Transform Infrared (FT-IR) spectroscopic imaging of human tissue sections towards improving pathology. J Vis Exp, 2015(95): p. 52332. https://www.ncbi.nlm.nih.gov/pubmed/25650759
Rygula, A., M.Z. Pacia, L. Mateuszuk, A. Kaczor, et al.
Identification of a biochemical marker for endothelial dysfunction using Raman spectroscopy. Analyst, 2015. 140(7): p. 2185–9. https://www.ncbi.nlm.nih.gov/pubmed/25664353
Perez-Guaita, D., P. Heraud, K.M. Marzec, M. de la Guardia, et al.
Comparison of transflection and transmission FTIR imaging measurements performed on differentially fixed tissue sections. Analyst, 2015. 140(7): p. 2376–82. https://www.ncbi.nlm.nih.gov/pubmed/25695358
Merk, V., M. Chanana, T. Keplinger, S. Gaan, et al.
Hybrid wood materials with improved fire retardance by bio-inspired mineralisation on the nano- and submicron level. Green Chemistry, 2015. 17(3): p. 1423–1428. http://dx.doi.org/10.1039/C4GC01862A
Menezes, R.C., M. Kai, K. Krause, C. Matthaus, et al.
Monitoring metabolites from Schizophyllum commune interacting with Hypholoma fasciculare combining LESA-HR mass spectrometry and Raman microscopy. Anal Bioanal Chem, 2015. 407(8): p. 2273–82. https://www.ncbi.nlm.nih.gov/pubmed/25542572
Longato, S., C. Woss, P. Hatzer-Grubwieser, C. Bauer, et al.
Post-mortem interval estimation of human skeletal remains by micro-computed tomography, mid-infrared microscopic imaging and energy dispersive X-ray mapping. Anal Methods, 2015. 7(7): p. 2917–2927. https://www.ncbi.nlm.nih.gov/pubmed/25878731
Leslie, L.S., T.P. Wrobel, D. Mayerich, S. Bindra, et al.
High definition infrared spectroscopic imaging for lymph node histopathology. PLoS One, 2015. 10(6): p. e0127238. https://www.ncbi.nlm.nih.gov/pubmed/26039216
Kochan, K., E. Maslak, S. Chlopicki, and M. Baranska
FT-IR imaging for quantitative determination of liver fat content in non-alcoholic fatty liver. Analyst, 2015. 140(15): p. 4997–5002. https://www.ncbi.nlm.nih.gov/pubmed/26051164
Kochan, K., P. Heraud, M. Kiupel, V. Yuzbasiyan-Gurkan, et al.
Comparison of FTIR transmission and transfection substrates for canine liver cancer detection. Analyst, 2015. 140(7): p. 2402–11. https://www.ncbi.nlm.nih.gov/pubmed/25502543
Keplinger, T., E. Cabane, M. Chanana, P. Hass, et al.
A versatile strategy for grafting polymers to wood cell walls. Acta Biomater, 2015. 11: p. 256–63. https://www.ncbi.nlm.nih.gov/pubmed/25242649
Kalmodia, S., S. Parameswaran, W. Yang, C.J. Barrow, et al.
Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy: An analytical technique to understand therapeutic responses at the molecular level. Sci Rep, 2015. 5: p. 16649. https://www.ncbi.nlm.nih.gov/pubmed/26568521
Hackett, M.J., S.E. Smith, S. Caine, H. Nichol, et al.
Novel bio-spectroscopic imaging reveals disturbed protein homeostasis and thiol redox with protein aggregation prior to hippocampal CA1 pyramidal neuron death induced by global brain ischemia in the rat. Free Radic Biol Med, 2015. http://www.ncbi.nlm.nih.gov/pubmed/26454085
Hackett, M.J., S. Caine, X. Liu, T.E. May, et al.
Development of single-beam wide-field infrared imaging to study sub-cellular neuron biochemistry. Vibrational Spectroscopy, 2015. 77: p. 51–59. https://dx.doi.org/10.1016/j.vibspec.2014.12.004
de Almeida Chaves Piva, L.A., L.L.R. Silva, Leandro José Raniero, C.S.P. Lima, et al.
Biochemical imaging of normal, adenoma, and colorectal adenocarcinoma tissues by Fourier transform infrared spectroscopy (FTIR) and morphological correlation by histopathological analysis: preliminary results. Research in Biomedical Engineering, 2015. 31(1): p. 10–18. https://dx.doi.org/10.1590/2446-4740.0321
Beleites, C., O. Guntinas-Lichius, G. Ernst, J. Popp, et al.
FTIR microscopic imaging of carcinoma tissue section with 4× and 15× objectives: Practical considerations. Biomedical Spectroscopy and Imaging, 2015. 4: p. 57–66. https://dx.doi.org/10.3233/BSI-140101
Wood, B.R., K.R. Bambery, M.W. Dixon, L. Tilley, et al.
Diagnosing malaria infected cells at the single cell level using focal plane array Fourier transform infrared imaging spectroscopy. Analyst, 2014. 139(19): p. 4769–74. http://www.ncbi.nlm.nih.gov/pubmed/25055796
Tolstik, T., C. Marquardt, C. Matthaus, N. Bergner, et al.
Discrimination and classification of liver cancer cells and proliferation states by Raman spectroscopic imaging. Analyst, 2014. 139(22): p. 6036–43. https://www.ncbi.nlm.nih.gov/pubmed/25271553
Stiebing, C., C. Matthaus, C. Krafft, A.A. Keller, et al.
Complexity of fatty acid distribution inside human macrophages on single cell level using Raman micro-spectroscopy. Anal Bioanal Chem, 2014. 406(27): p. 7037–46. https://www.ncbi.nlm.nih.gov/pubmed/24939132
Pallua, J.D., S.H. Unterberger, G. Metzler, K. Pfaller, et al.
Application of 3-D surface reconstruction by mid- and near-infrared microscopic imaging for anatomical studies on Hericium coralloides basidiomata. Anal. Methods, 2014. 6(4): p. 149–1157. https://dx.doi.org/10.1039/C3AY42082E
Marzec, K.M., T.P. Wrobel, A. Rygula, E. Maslak, et al.
Visualization of the biochemical markers of atherosclerotic plaque with the use of Raman, IR and AFM. J Biophotonics, 2014. 7(9): p. 744–56. https://www.ncbi.nlm.nih.gov/pubmed/24604883
Gierlinger, N.
Revealing changes in molecular composition of plant cell walls on the micron-level by Raman mapping and vertex component analysis (VCA). Front Plant Sci, 2014. 5: p. 306. https://www.ncbi.nlm.nih.gov/pubmed/25071792
Chonanant, C., K.R. Bambery, N. Jearanaikoon, S. Chio-Srichan, et al.
Discrimination of micromass-induced chondrocytes from human mesenchymal stem cells by focal plane array-Fourier transform infrared microspectroscopy. Talanta, 2014. 130: p. 39–48. https://www.ncbi.nlm.nih.gov/pubmed/25159377
Baker, M.J., J. Trevisan, P. Bassan, R. Bhargava, et al.
Using Fourier transform IR spectroscopy to analyze biological materials. Nat Protoc, 2014. 9(8): p. 1771–91. https://www.ncbi.nlm.nih.gov/pubmed/24992094
Anwar Alebrahim, M., C. Krafft, W. Sekhaneh, B. Sigusch, et al.
ATR-FTIR and Raman spectroscopy of primary and permanent teeth. Biomedical Spectroscopy and Imaging, 2014. 3(1): p. 15–27. https://dx.doi.org/10.3233/BSI-130059
Zohdi, V., B.R. Wood, J.T. Pearson, K.R. Bambery, et al.
Evidence of altered biochemical composition in the hearts of adult intrauterine growth-restricted rats. Eur J Nutr, 2013. 52(2): p. 749–58. https://www.ncbi.nlm.nih.gov/pubmed/22645107
Zhang, N., X. Liu, L. Yu, R. Shanks, et al.
Phase composition and interface of starch-gelatin blends studied by synchrotron FTIR micro-spectroscopy. Carbohydr Polym, 2013. 95(2): p. 649–53. https://www.ncbi.nlm.nih.gov/pubmed/23648025
Wrobel, T.P., L. Mateuszuk, R.B. Kostogrys, S. Chlopicki, et al.
Quantification of plaque area and characterization of plaque biochemical composition with atherosclerosis progression in ApoE/LDLR(-/-) mice by FT-IR imaging. Analyst, 2013. 138(21): p. 6645–52. http://www.ncbi.nlm.nih.gov/pubmed/24040642
Vongsvivut, J., P. Heraud, A. Gupta, M. Puri, et al.
FTIR microspectroscopy for rapid screening and monitoring of polyunsaturated fatty acid production in commercially valuable marine yeasts and protists. Analyst, 2013. 138(20): p. 6016–31. https://www.ncbi.nlm.nih.gov/pubmed/23957051
Sharma, M., J.C. Crosbie, L. Puskar, and P.A. Rogers
Microbeam-irradiated tumour tissue possesses a different infrared absorbance profile compared to broad beam and sham-irradiated tissue. Int J Radiat Biol, 2013. 89(2): p. 79–87. https://www.ncbi.nlm.nih.gov/pubmed/22892032
Posch, A.E., C. Koch, M. Helmel, M. Marchetti-Deschmann, et al.
Combining light microscopy, dielectric spectroscopy, MALDI intact cell mass spectrometry, FTIR spectromicroscopy and multivariate data mining for morphological and physiological bioprocess characterization of filamentous organisms. Fungal Genet Biol, 2013. 51: p. 1–11. https://www.ncbi.nlm.nih.gov/pubmed/23220594
Pezzei, C., A. Brunner, G.K. Bonn, and C.W. Huck
Fourier transform infrared imaging analysis in discrimination studies of bladder cancer. Analyst, 2013. 138(19): p. 5719–25. https://www.ncbi.nlm.nih.gov/pubmed/23897512
Mudronja, D., F. Vanmeert, K. Hellemans, S. Fazinic, et al.
Efficiency of applying ammonium oxalate for protection of monumental limestone by poultice, immersion and brushing methods. Applied Physics A, 2013. 111(1): p. 109–119. https://dx.doi.org/10.1007/s00339-012-7365-9
Li, Q., X. He, Y. Wang, H. Liu, et al.
Review of spectral imaging technology in biomedical engineering: achievements and challenges. J Biomed Opt, 2013. 18(10): p. 100901. https://www.ncbi.nlm.nih.gov/pubmed/24114019
Kobrina, Y., L. Rieppo, S. Saarakkala, H.J. Pulkkinen, et al.
Cluster analysis of infrared spectra can differentiate intact and repaired articular cartilage. Osteoarthritis Cartilage, 2013. 21(3): p. 462–9. http://www.ncbi.nlm.nih.gov/pubmed/23267848
Huck-Pezzei, V.A., L.K. Bittner, J.D. Pallua, H. Sonderegger, et al.
A chromatographic and spectroscopic analytical platform for the characterization of St John's wort extract adulterations. Analytical Methods, 2013. 5(3): p. 616–628. http://dx.doi.org/10.1039/C2AY26030A
Croxford, A.M., S. Whittingham, D. McNaughton, K.S. Nandakumar, et al.
Type II collagen-specific antibodies induce cartilage damage in mice independent of inflammation. Arthritis Rheum, 2013. 65(3): p. 650–9. https://www.ncbi.nlm.nih.gov/pubmed/23239042
Cao, J., E.S. Ng, D. McNaughton, E.G. Stanley, et al.
Fourier transform infrared microspectroscopy reveals that tissue culture conditions affect the macromolecular phenotype of human embryonic stem cells. Analyst, 2013. 138(14): p. 4147–60. https://www.ncbi.nlm.nih.gov/pubmed/23745179
Cao, J., E.S. Ng, D. McNaughton, E.G. Stanley, et al.
Fourier transform infrared microspectroscopy reveals unique phenotypes for human embryonic and induced pluripotent stem cell lines and their progeny. J Biophotonics, 2013: p. 167–182. http://www.ncbi.nlm.nih.gov/pubmed/23616434
Bergner, N., A. Medyukhina, K.D. Geiger, M. Kirsch, et al.
Hyperspectral unmixing of Raman micro-images for assessment of morphological and chemical parameters in non-dried brain tumor specimens. Anal Bioanal Chem, 2013. 405(27): p. 8719–28. https://www.ncbi.nlm.nih.gov/pubmed/23934397
Alexandrov, T. and P. Lasch
Segmentation of confocal Raman microspectroscopic imaging data using edge-preserving denoising and clustering. Anal Chem, 2013. 85(12): p. 5676–83. https://www.ncbi.nlm.nih.gov/pubmed/23701523
Yu, P.
Board-invited review: Sensitivity and responses of functional groups to feed processing methods on a molecular basis. J Anim Sci Biotechnol, 2012. 3(1): p. 40. https://www.ncbi.nlm.nih.gov/pubmed/23216994
Wrobel, T.P., K. Majzner, and M. Baranska
Protein profile in vascular wall of atherosclerotic mice analyzed ex vivo using FT-IR spectroscopy. Spectrochim Acta A Mol Biomol Spectrosc, 2012. 96: p. 940–5. https://www.ncbi.nlm.nih.gov/pubmed/22944148
Tosi, G., E. Giorgini, C. Rubini, S. Sabbatini, et al.
Vibrational spectroscopy as a supporting technique in clinical diagnosis and prognosis of atherosclerotic carotid plaques: a review. Anal Quant Cytopathol Histpathol, 2012. 34(4): p. 214–32. https://www.ncbi.nlm.nih.gov/pubmed/23016468
Puskar, L., K.R. Bambery, M.J. Tobin, and N. Mills
Infrared Beamline Data Analysis Workshop on Resonant Mie Scattering Correction. Synchrotron Radiation News, 2012. 25(5): p. 43–44. https://dx.doi.org/10.1080/08940886.2012.720168
Pallua, J.D., W. Recheis, R. Poder, K. Pfaller, et al.
Morphological and tissue characterization of the medicinal fungus Hericium coralloides by a structural and molecular imaging platform. Analyst, 2012. 137(7): p. 1584–95. https://www.ncbi.nlm.nih.gov/pubmed/22158509
Pallua, J.D., C. Pezzei, B. Zelger, G. Schaefer, et al.
Fourier transform infrared imaging analysis in discrimination studies of squamous cell carcinoma. Analyst, 2012. 137(17): p. 3965–74. https://www.ncbi.nlm.nih.gov/pubmed/22792538
Lasch, P.
Spectral pre-processing for biomedical vibrational spectroscopy and microspectroscopic imaging. Chemometrics and Intelligent Laboratory Systems, 2012. 117: p. 100–114. https://dx.doi.org/10.1016/j.chemolab.2012.03.011
Kremer, B., K. Owocki, A. Królikowska, B. Wrzosek, et al.
Mineral microbial structures in a bone of the Late Cretaceous dinosaur Saurolophus angustirostris from the Gobi Desert, Mongolia — a Raman spectroscopy study. Palaeogeography, Palaeoclimatology, Palaeoecology, 2012. 358-360: p. 51–61. https://doi.org/10.1016/j.palaeo.2012.07.020
Huck-Pezzei, V.A., J.D. Pallua, C. Pezzei, L.K. Bittner, et al.
Fourier transform infrared imaging analysis in discrimination studies of St. John's wort (Hypericum perforatum). Anal Bioanal Chem, 2012. 404(6-7): p. 1771–8. https://www.ncbi.nlm.nih.gov/pubmed/23053167
Hackett, M.J., J. Lee, F. El-Assaad, J.A. McQuillan, et al.
FTIR imaging of brain tissue reveals crystalline creatine deposits are an ex vivo marker of localized ischemia during murine cerebral malaria: general implications for disease neurochemistry. ACS Chem Neurosci, 2012. 3(12): p. 1017–24. https://www.ncbi.nlm.nih.gov/pubmed/23259037
Bozkurt, O., S. Haman Bayari, M. Severcan, C. Krafft, et al.
Structural alterations in rat liver proteins due to streptozotocin-induced diabetes and the recovery effect of selenium: fourier transform infrared microspectroscopy and neural network study. J Biomed Opt, 2012. 17(7): p. 076023. https://www.ncbi.nlm.nih.gov/pubmed/22894506
Bambery, K.R., B.R. Wood, and D. McNaughton
Resonant Mie scattering (RMieS) correction applied to FTIR images of biological tissue samples. Analyst, 2012. 137(1): p. 126–32. https://www.ncbi.nlm.nih.gov/pubmed/22076587
Wagner, C., W. Buchegger, M. Vellekoop, M. Kraft, et al.
Time-resolved mid-IR spectroscopy of (bio)chemical reactions in solution utilizing a new generation of continuous-flow micro-mixers. Anal Bioanal Chem, 2011. 400(8): p. 2487–97. https://www.ncbi.nlm.nih.gov/pubmed/21369756
Vernoud, L., H.A. Bechtel, M.C. Martin, J.A. Reffner, et al.
Characterization of multilayered glitter particles using synchrotron FT-IR microscopy. Forensic Sci Int, 2011. 210(1-3): p. 47–51. https://www.ncbi.nlm.nih.gov/pubmed/21354727
Tan, K.M., C.S. Herrington, and C.T. Brown
Discrimination of normal from pre-malignant cervical tissue by Raman mapping of de-paraffinized histological tissue sections. J Biophotonics, 2011. 4(1-2): p. 40–8. https://www.ncbi.nlm.nih.gov/pubmed/20082345
Tahtouh, M., S.A. Scott, J.R. Kalman, and B.J. Reedy
Four novel alkyl 2-cyanoacylate monomers and their use in latent fingermark detection by mid-infrared spectral imaging. Forensic Sci Int, 2011. 207(1-3): p. 223–38. https://www.ncbi.nlm.nih.gov/pubmed/21074340
St John, A., S. Best, Y. Wang, M. Tobin, et al.
Micron-scale 2-D Mapping of the Composition and Homogeneity of Polymer Inclusion Membranes. CSIRO Publishing, 2011. http://dx.doi.org/10.1071/CH10458
Meyer, T., N. Bergner, C. Bielecki, C. Krafft, et al.
Nonlinear microscopy, infrared, and Raman microspectroscopy for brain tumor analysis. J Biomed Opt, 2011. 16(2): p. 021113. https://www.ncbi.nlm.nih.gov/pubmed/21361676
Lasch, P. and W. Petrich
Data Acquisition and Analysis in Biomedical Vibrational Spectroscopy. Book: Biomedical Applications of Synchrotron Infrared Microspectroscopy (editor: David Moss), 2011. Chapter 6. https://dx.doi.org/10.1039/9781849731997-00192
Krafft, C., M.A. Diderhoshan, P. Recknagel, M. Miljkovic, et al.
Crisp and soft multivariate methods visualize individual cell nuclei in Raman images of liver tissue sections. Vibrational Spectroscopy, 2011. 55(1): p. 90–100. https://dx.doi.org/10.1016/j.vibspec.2010.09.003
Hedegaard, M., M. C., S. Hassing, C. Krafft, et al.
Spectral unmixing and clustering algorithms for assessment of single cells by Raman microscopic imaging. Theoretical Chemistry Accounts, 2011. 130(4-6): p. 1249–1260. https://dx.doi.org/10.1007/s00214-011-0957-1
Hajimohammadi, A., J.L. Provis, and J.S.J. van Deventer
The effect of silica availability on the mechanism of geopolymerisation. Cement and Concrete Research, 2011. 41(3): p. 210–216. https://dx.doi.org/10.1016/j.cemconres.2011.02.001
Hajimohammadi, A., J.L. Provis, and J.S. van Deventer
Time-resolved and spatially-resolved infrared spectroscopic observation of seeded nucleation controlling geopolymer gel formation. J Colloid Interface Sci, 2011. 357(2): p. 384–92. https://www.ncbi.nlm.nih.gov/pubmed/21397245
Croxford, A., M. Rowley, D. McNaughton, K.S. Nandakumar, et al.
Chemical changes demonstrated in cartilage by synchrotron infrared microspectroscopy in an antibody-induced murine model of rheumatoid arthritis. Journal of Biomedical Optics, 2011. 16(6): p. 066004. https://doi.org/10.1117/1.3585680
Chonanant, C., N. Jearanaikoon, C. Leelayuwat, T. Limpaiboon, et al.
Characterisation of chondrogenic differentiation of human mesenchymal stem cells using synchrotron FTIR microspectroscopy. Analyst, 2011. 136(12): p. 2542–51. https://www.ncbi.nlm.nih.gov/pubmed/21526247
Arora, R., G.I. Petrov, and V.V. Yakovlev
Hyperspectral coherent anti-Stokes Raman scattering microscopy imaging through turbid medium. J Biomed Opt, 2011. 16(2): p. 021116. https://www.ncbi.nlm.nih.gov/pubmed/21361679
Arora, R., G.I. Petrov, and V. Yakovlev
Coherent anti-Stokes Raman scattering imaging through turbid medium. SPIE BiOS, 2011. 7903. https://dx.doi.org/10.1117/12.875433
Zhao, R., L. Quaroni, and A.G. Casson
Fourier transform infrared (FTIR) spectromicroscopic characterization of stem-like cell populations in human esophageal normal and adenocarcinoma cell lines. Analyst, 2010. 135(1): p. 53–61. https://www.ncbi.nlm.nih.gov/pubmed/20024181
Tosi, G., C. Conti, E. Giorgini, P. Ferraris, et al.
FTIR microspectroscopy of melanocytic skin lesions: a preliminary study. Analyst, 2010. 135(12): p. 3213–9. https://www.ncbi.nlm.nih.gov/pubmed/20953511
Tanthanuch, W., K. Thumanu, C. Lorthongpanich, R. Parnpai, et al.
Neural differentiation of mouse embryonic stem cells studied by FTIR spectroscopy. Journal of Molecular Structure, 2010. 967(1): p. 189–195. https://dx.doi.org/10.1016/j.molstruc.2010.01.007
Schulte, F., V. Joseph, U. Panne, and J. Kneipp
Applications of Raman and Surface-Enhanced Raman Scattering to the Analysis of Eukaryotic Samples. Emerging Raman Applications and Techniques in Biomedical and Pharmaceutical Fields, 2010: p. 71–95. https://dx.doi.org/10.1007/978-3-642-02649-2_4
Pezzei, C., J.D. Pallua, G. Schaefer, C. Seifarth, et al.
Characterization of normal and malignant prostate tissue by Fourier transform infrared microspectroscopy. Mol Biosyst, 2010. 6(11): p. 2287–95. https://www.ncbi.nlm.nih.gov/pubmed/20871936
Miljkovic, M., T. Chernenko, M.J. Romeo, B. Bird, et al.
Label-free imaging of human cells: algorithms for image reconstruction of Raman hyperspectral datasets. Analyst, 2010. 135(8): p. 2002–13. https://www.ncbi.nlm.nih.gov/pubmed/20526496
Matschulat, A., D. Drescher, and J. Kneipp
Surface-enhanced Raman scattering hybrid nanoprobe multiplexing and imaging in biological systems. ACS Nano, 2010. 4(6): p. 3259–69. https://www.ncbi.nlm.nih.gov/pubmed/20503969
Mariani, M.M., L.J. Maccoux, C. Matthaus, M. Diem, et al.
Micro-Raman detection of nuclear membrane lipid fluctuations in senescent epithelial breast cancer cells. Anal Chem, 2010. 82(10): p. 4259–63. https://www.ncbi.nlm.nih.gov/pubmed/20380478
Leskovjan, A.C., A. Kretlow, and L.M. Miller
Fourier transform infrared imaging showing reduced unsaturated lipid content in the hippocampus of a mouse model of Alzheimer's disease. Anal Chem, 2010. 82(7): p. 2711–6. https://www.ncbi.nlm.nih.gov/pubmed/20187625
Krafft, C., N. Bergner, C. Matthäus, B.F. Romeike, et al.
FTIR, Raman, and CARS microscopic imaging for histopathologic assessment of brain tumors. SPIE BiOS, 2010. 7560. https://dx.doi.org/10.1117/12.851080
Heraud, P., E.S. Ng, S. Caine, Q.C. Yu, et al.
Fourier transform infrared microspectroscopy identifies early lineage commitment in differentiating human embryonic stem cells. Stem Cell Res, 2010. 4(2): p. 140–7. https://www.ncbi.nlm.nih.gov/pubmed/20060373
Heraud, P., S. Caine, N. Campanale, T. Karnezis, et al.
Early detection of the chemical changes occurring during the induction and prevention of autoimmune-mediated demyelination detected by FT-IR imaging. Neuroimage, 2010. 49(2): p. 1180–9. https://www.ncbi.nlm.nih.gov/pubmed/19796690
Hajimohammadi, A., J.L. Provis, and J.S.J. van Deventer
Effect of Alumina Release Rate on the Mechanism of Geopolymer Gel Formation. Chemistry of Materials, 2010. 22(18): p. 5199–5208. https://doi.org/10.1021/cm101151n
Giorgini, E., C. Conti, P. Ferraris, S. Sabbatini, et al.
Effects of Lactobacillus rhamnosus on zebrafish oocyte maturation: an FTIR imaging and biochemical analysis. Anal Bioanal Chem, 2010. 398(7-8): p. 3063–72. https://www.ncbi.nlm.nih.gov/pubmed/20936269
Ellis, G., G. Santoro, M.A. Gómez, and C. Marco
Synchrotron IR microspectroscopy: Opportunities in polymer science. IOP Conference Series: Materials Science and Engineering, 2010. 14: p. 012019. https://dx.doi.org/10.1088/1757-899X/14/1/012019
Carter, E.A., B.S. Rayner, A.I. McLeod, L.E. Wu, et al.
Silicon nitride as a versatile growth substrate for microspectroscopic imaging and mapping of individual cells. Mol Biosyst, 2010. 6(7): p. 1316–22. https://www.ncbi.nlm.nih.gov/pubmed/20445927
Asghari-Khiavi, M., B.R. Wood, A. Mechler, K.R. Bambery, et al.
Correlation of atomic force microscopy and Raman micro-spectroscopy to study the effects of ex vivo treatment procedures on human red blood cells. Analyst, 2010. 135(3): p. 525–30. https://www.ncbi.nlm.nih.gov/pubmed/20174705
Wood, B.R., A. Hermelink, P. Lasch, K.R. Bambery, et al.
Resonance Raman microscopy in combination with partial dark-field microscopy lights up a new path in malaria diagnostics. Analyst, 2009. 134(6): p. 1119–25. https://www.ncbi.nlm.nih.gov/pubmed/19475137
Untereiner, V., O. Piot, M.D. Diebold, O. Bouche, et al.
Optical diagnosis of peritoneal metastases by infrared microscopic imaging. Anal Bioanal Chem, 2009. 393(6-7): p. 1619–27. https://www.ncbi.nlm.nih.gov/pubmed/19219424
Thumanu, K., W. Tanthanuch, C. Lorthongpanich, P. Heraud, et al.
FTIR microspectroscopic imaging as a new tool to distinguish chemical composition of mouse blastocyst. Journal of Molecular Structure, 2009. 933(1): p. 104–111. https://dx.doi.org/10.1016/j.molstruc.2009.06.003
Rutlidge, H.T. and B.J. Reedy
Classification of heterogeneous solids using infrared hyperspectral imaging. Appl Spectrosc, 2009. 63(2): p. 172–9. https://www.ncbi.nlm.nih.gov/pubmed/19215646
Quaroni, L. and A.G. Casson
Characterization of Barrett esophagus and esophageal adenocarcinoma by Fourier-transform infrared microscopy. Analyst, 2009. 134(6): p. 1240–6. https://www.ncbi.nlm.nih.gov/pubmed/19475154
Pääkkönen, J., N. Päivinen, and P. Toivanen
Challenges in Computational Histopathology: The Feasibility of FTIR Spectroscopy in Clustering. 2009 Fifth International Conference on Signal Image Technology and Internet Based Systems, 2009: p. 59–64. https://dx.doi.org/10.1109/SITIS.2009.20
Miljković, M., L. Quintero, Matthäus, C., T. Chernenko, et al.
A Comparison of Imaging Algorithms for the Analysis of Raman Hyperspectral Datasets from Human Cells. Poster, 2009. no link available
McNaughton, D., B.R. Wood, T.C. Cox, J.D. Drenckhahn, et al.
3-D Imaging of Biomedical Samples. Infrared and Raman Spectroscopic Imaging, 2009: p. 203–221. https://dx.doi.org/10.1002/9783527628230.ch6
Lasch, P., A. Hermelink, and D. Naumann
Correction of axial chromatic aberrations in confocal Raman microspectroscopic measurements of a single microbial spore. Analyst, 2009. 134(6): p. 1162–70. https://www.ncbi.nlm.nih.gov/pubmed/19475143
Krafft, C., A.A. Ramoji, C. Bielecki, N. Vogler, et al.
A comparative Raman and CARS imaging study of colon tissue. J Biophotonics, 2009. 2(5): p. 303–12. https://www.ncbi.nlm.nih.gov/pubmed/19434617
Umeri, A., T.A. Kuku, N. Scuor, and V. Sergo
Raman investigation of the ageing of Ni-BaTiO3 multilayer ceramic capacitors. Journal of Materials Science, 2008. 43(3): p. 922–926. https://dx.doi.org/10.1007/s10853-007-2215-4
Toyran, N., F. Severcan, M. Severcan, and B. Turan
Effects of selenium supplementation on rat heart apex and right ventricle myocardia by using FTIR spectroscopy: A cluster analysis and neural network approach. Food Chemistry, 2008. 110(3): p. 590–597. https://dx.doi.org/10.1016/j.foodchem.2008.02.044
Schulte, F., J. Lingott, U. Panne, and J. Kneipp
Chemical characterization and classification of pollen. Anal Chem, 2008. 80(24): p. 9551–6. https://www.ncbi.nlm.nih.gov/pubmed/18975984
Ooi, G.J., J. Fox, K. Siu, R. Lewis, et al.
Fourier transform infrared imaging and small angle x-ray scattering as a combined biomolecular approach to diagnosis of breast cancer. Med Phys, 2008. 35(5): p. 2151–61. https://www.ncbi.nlm.nih.gov/pubmed/18561690
Krafft, C., D. Codrich, G. Pelizzo, and V. Sergo
Raman and FTIR imaging of lung tissue: Methodology for control samples. Vibrational Spectroscopy, 2008. 46(2): p. 141–149. https://dx.doi.org/10.1016/j.vibspec.2007.12.007
Chiovitti, A., P. Heraud, T.M. Dugdale, O.M. Hodson, et al.
Divalent cations stabilize the aggregation of sulfated in the adhesive nanofibers of the biofouling diatom Toxarium undulatum. Soft Matter, 2008. 4(4): p. 811–820. https://www.ncbi.nlm.nih.gov/pubmed/32907187
Bonifacio, A., S. Finaurini, C. Krafft, S. Parapini, et al.
Spatial distribution of heme species in erythrocytes infected with Plasmodium falciparum by use of resonance Raman imaging and multivariate analysis. Anal Bioanal Chem, 2008. 392(7-8): p. 1277–82. https://www.ncbi.nlm.nih.gov/pubmed/18836854
Bird, B., M. Miljkovic, M.J. Romeo, J. Smith, et al.
Infrared micro-spectral imaging: distinction of tissue types in axillary lymph node histology. BMC Clin Pathol, 2008. 8: p. 8. https://www.ncbi.nlm.nih.gov/pubmed/18759967
Ali, K., Y. Lu, C. Christensen, T. May, et al.
Fourier transform infrared spectromicroscopy and hierarchical cluster analysis of human meningiomas. Int J Mol Med, 2008. 21(3): p. 297–301. https://www.ncbi.nlm.nih.gov/pubmed/18288376
Toyran, N., B. Turan, and F. Severcan
Selenium alters the lipid content and protein profile of rat heart: an FTIR microspectroscopic study. Arch Biochem Biophys, 2007. 458(2): p. 184–93. https://www.ncbi.nlm.nih.gov/pubmed/17240348
Toyran, N., F. Severcan, M. Severcan, and B. Turan
Investigation of diabetes-induced effect on apex of rat heart myocardium by using cluster analysis and neural network approach: An FTIR study. Journal of Spectroscopy, 2007. 21: p. 269618. https://dx.doi.org/10.1155/2007/269618
Peiqiang, Y.
Protein Molecular Structures, Protein SubFractions, and Protein Availability Affected by Heat Processing: A Review. American Journal of Biochemistry and Biotechnology, 2007. 3(2). https://dx.doi.org/10.3844/ajbbsp.2007.66.86
McNaughton, D. and B.R. Wood
Applications of fourier-transform infrared imaging in cancer research. ACS Symposium Series. American Chemical Society, 2007. 963: p. 14–29. https://dx.doi.org/10.1021/bk-2007-0963.ch002
Lasch, P., M. Diem, W. Hansch, and D. Naumann
Artificial neural networks as supervised techniques for FT-IR microspectroscopic imaging. J Chemom, 2007. 20(5): p. 209–220. https://www.ncbi.nlm.nih.gov/pubmed/19960119
Lasch, P.
Diagnostic Potentials of FT-IR Microspectrometry in the Examination of Colorectal Adenocarcinomas. Presented at the 1st International Workshop On Spectral Diagnostics (SD-1), Boston, June 21st - 23rd, 2007., 2007. 1(1). no link available
Heraud, P., S. Caine, G. Sanson, R. Gleadow, et al.
Focal plane array infrared imaging: a new way to analyse leaf tissue. New Phytol, 2007. 173(1): p. 216–25. https://www.ncbi.nlm.nih.gov/pubmed/17176407
Dumas, P., G.D. Sockalingum, and J. Sule-Suso
Adding synchrotron radiation to infrared microspectroscopy: what's new in biomedical applications? Trends Biotechnol, 2007. 25(1): p. 40–4. https://www.ncbi.nlm.nih.gov/pubmed/17116340
Chew, S.F., B.R. Wood, C. Kanaan, J. Browning, et al.
Fourier transform infrared imaging as a method for detection of HLA class I expression in melanoma without the use of antibody. Tissue Antigens, 2007. 69 Suppl 1: p. 252–8. https://www.ncbi.nlm.nih.gov/pubmed/17445214
Bayari, S.H., H. Utku, Y. Ikemoto, B. Celasun, et al.
Synchrotron FT-IR microspectroscopic analysis of necrotic bone. Spectroscopy, 2007. 21: p. 732013. https://dx.doi.org/10.1155/2007/732013
Wood, B.R., K.R. Bambery, C.J. Evans, M.A. Quinn, et al.
A three-dimensional multivariate image processing technique for the analysis of FTIR spectroscopic images of multiple tissue sections. BMC Med Imaging, 2006. 6(12): p. 12. https://www.ncbi.nlm.nih.gov/pubmed/17014733
Romeo, M., B. Mohlenhoff, M. Jennings, and M. Diem
Infrared micro-spectroscopic studies of epithelial cells. Biochim Biophys Acta, 2006. 1758(7): p. 915–22. https://www.ncbi.nlm.nih.gov/pubmed/16797481
Romeo, M., B. Mohlenhoff, and M. Diem
Infrared micro-spectroscopy of human cells: Causes for the spectral variance of oral mucosa (buccal) cells. Vib Spectrosc, 2006. 42(1): p. 9–14. https://www.ncbi.nlm.nih.gov/pubmed/19750140
Matthaus, C., S. Boydston-White, M. Miljkovic, M. Romeo, et al.
Raman and infrared microspectral imaging of mitotic cells. Appl Spectrosc, 2006. 60(1): p. 1–8. https://www.ncbi.nlm.nih.gov/pubmed/16454901
Liu, K.Z., A. Man, R.A. Shaw, B. Liang, et al.
Molecular determination of liver fibrosis by synchrotron infrared microspectroscopy. Biochim Biophys Acta, 2006. 1758(7): p. 960–7. https://www.ncbi.nlm.nih.gov/pubmed/16806057
Lasch, P. and D. Naumann
Spatial resolution in infrared microspectroscopic imaging of tissues. Biochim Biophys Acta, 2006. 1758(7): p. 814–29. https://www.ncbi.nlm.nih.gov/pubmed/16875659
Fabian, H., N.A. Thi, M. Eiden, P. Lasch, et al.
Diagnosing benign and malignant lesions in breast tissue sections by using IR-microspectroscopy. Biochim Biophys Acta, 2006. 1758(7): p. 874–82. https://www.ncbi.nlm.nih.gov/pubmed/16814743
Bambery, K.R., E. Schultke, B.R. Wood, S.T. Rigley MacDonald, et al.
A Fourier transform infrared microspectroscopic imaging investigation into an animal model exhibiting glioblastoma multiforme. Biochim Biophys Acta, 2006. 1758(7): p. 900–7. https://www.ncbi.nlm.nih.gov/pubmed/16815240
Yu, P.
Application of cluster analysis (CLA) in feed chemical imaging to accurately reveal structural-chemical features of feeds and plants within cellular dimension. J Agric Food Chem, 2005. 53(8): p. 2872–80. https://www.ncbi.nlm.nih.gov/pubmed/15826033
Yu, P.
Applications of hierarchical cluster analysis (CLA) and principal component analysis (PCA) in feed structure and feed molecular chemistry research, using synchrotron-based Fourier transform infrared (FTIR) microspectroscopy. J Agric Food Chem, 2005. 53(18): p. 7115–27. https://www.ncbi.nlm.nih.gov/pubmed/16131119
Wood, B.R. and D. McNaughton
FPA Imaging and Spectroscopy for Monitoring Chemical Changes in Tissue. Spectrochemical Analysis Using Infrared Multichannel Detectors, 2005: p. 204–233. https://dx.doi.org/10.1002/9780470988541.ch10
Wood, B.R., K.R. Bambery, L.M. Miller, M. Quinn, et al.
Infrared imaging of normal and diseased cervical tissue sections. Proc SPIE, 2005. 5651: p. 78–84. http://dx.doi.org/10.1117/12.582294
Wang, Q., A. Kretlow, M. Beekes, D. Naumann, et al.
In situ characterization of prion protein structure and metal accumulation in scrapie-infected cells by synchrotron infrared and X-ray imaging. Vibrational Spectroscopy, 2005. 38(1): p. 61–69. https://dx.doi.org/10.1016/j.vibspec.2005.02.023
Tahtouh, M., J.R. Kalman, C. Roux, C. Lennard, et al.
The detection and enhancement of latent fingermarks using infrared chemical imaging. J Forensic Sci, 2005. 50(1): p. 64–72. https://www.ncbi.nlm.nih.gov/pubmed/15830998
Romeo, M.J. and M. Diem
Infrared spectral imaging of lymph nodes: Strategies for analysis and artifact reduction. Vib Spectrosc, 2005. 38(1-2): p. 115–119. https://www.ncbi.nlm.nih.gov/pubmed/19718274
Hynes, A., D.A. Scott, A. Man, D.L. Singer, et al.
Molecular mapping of periodontal tissues using infrared microspectroscopy. BMC Med Imaging, 2005. 5(1): p. 2. https://www.ncbi.nlm.nih.gov/pubmed/15890072
Gough, K.M., M. Rak, A. Bookatz, B. Del, M., et al.
Choices for tissue visualization with IR microspectroscopy. Vib Spec, 2005. 38(1-2): p. 133–141. https://dx.doi.org/10.1016/j.vibspec.2005.02.027
Flynn, K., R. O'Leary, C. Lennard, C. Roux, et al.
Forensic applications of infrared chemical imaging: multi-layered paint chips. J Forensic Sci, 2005. 50(4): p. 832–41. https://www.ncbi.nlm.nih.gov/pubmed/16078484
Crombie, D.E., M. Turer, B.B. Zuasti, B. Wood, et al.
Destructive effects of murine arthritogenic antibodies to type II collagen on cartilage explants in vitro. Arthritis Res Ther, 2005. 7(5): p. R927–37. https://www.ncbi.nlm.nih.gov/pubmed/16207334
Bai, L. and Y. Liu
Classification of FTIR cancer data using wavelets and fuzzy C-means clustering. Optics East 2005, 2005. 6001. https://dx.doi.org/10.1117/12.629946
Yu, P.
Application of advanced synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy to animal nutrition and feed science: a novel approach. Br J Nutr, 2004. 92(6): p. 869–85. https://www.ncbi.nlm.nih.gov/pubmed/15613249
Wood, B.R., L. Chiriboga, H. Yee, M.A. Quinn, et al.
Fourier transform infrared (FTIR) spectral mapping of the cervical transformation zone, and dysplastic squamous epithelium. Gynecol Oncol, 2004. 93(1): p. 59–68. https://www.ncbi.nlm.nih.gov/pubmed/15047215
Lasch, P., N.A. Ngo Thi, H. Fabian, and D. Naumann
Infrarot-Imaging für die pathohistologische Diagnostik. Laborwelt, 2004. 4(2): p. 8–12. no link available
Lasch, P., W. Haensch, D. Naumann, and M. Diem
Imaging of colorectal adenocarcinoma using FT-IR microspectroscopy and cluster analysis. Biochim Biophys Acta, 2004. 1688(2): p. 176–86. https://www.ncbi.nlm.nih.gov/pubmed/14990348
Lasch, P., M. Diem, and D. Naumann
FT-IR microspectroscopic imaging of prostate tissue sections. Proc SPIE, 2004. 5321(Biomedical Vibrational Spectroscopy and Biohazard Detection Technologies). https://dx.doi.org/10.1117/12.529125
Kneipp, J., L.M. Miller, S. Spassov, F. Sokolowski, et al.
Prion structure investigated in situ, ex vivo, and in vitro by FTIR spectroscopy. Biomedical Optics 2004, 2004. 5321: p. 9. https://dx.doi.org/10.1117/12.529918
Dumas, P., N. Jamin, J.L. Teillaud, L.M. Miller, et al.
Imaging capabilities of synchrotron infrared microspectroscopy. Faraday Discuss, 2004. 126: p. 289–302; discussion 303–11. http://www.ncbi.nlm.nih.gov/pubmed/14992414
Diem, M., M. Romeo, S. Boydston-White, M. Miljkovic, et al.
A decade of vibrational micro-spectroscopy of human cells and tissue (1994-2004). Analyst, 2004. 129(10): p. 880–5. http://www.ncbi.nlm.nih.gov/pubmed/15457314
Diem, M., M. Romeo, S. Boydston-White, M. Miljcovic, et al.
Infrared spectral imaging of human cells and tissue: an approach to objective, machine-based histopathology. Infrared and Millimeter Waves, Conference Digest of the 2004 Joint 29th International Conference on 2004 and 12th International Conference on Terahertz Electronics, 2004., 2004: p. 75–76. https://dx.doi.org/10.1109/ICIMW.2004.1421960
Bambery, K.R., B.R. Wood, M.A. Quinn, and D. McNaughton
Fourier Transform Infrared Imaging and Unsupervised Hierarchical Clustering Applied to Cervical Biopsies. Australian Journal of Chemistry, 2004. 57(12): p. 1139–1143. https://dx.doi.org/10.1071/CH04137
Kneipp, J., L.M. Miller, M. Joncic, M. Kittel, et al.
In situ identification of protein structural changes in prion-infected tissue. Biochim Biophys Acta, 2003. 1639(3): p. 152–8. https://www.ncbi.nlm.nih.gov/pubmed/14636946
Fabian, F., P. Lasch, M. Boese, and W. Haensch
Infrared microspectroscopic imaging of benign breast tumor tissue sections. J Mol Struct, 2003. 661–662: p. 411–417. https://dx.doi.org/10.1016/j.molstruc.2003.07.002
Dumas, P. and M.J. Tobin
A bright source for infrared microspectroscopy: synchrotron radiation. Spectroscopy Europe, 2003. no link available
Lasch, P., W. Haensch, E.N. Lewis, L.H. Kidder, et al.
Characterization of Colorectal Adenocarcinoma Sections by Spatially Resolved FT-IR Microspectroscopy. Appl Spectrosc, 2002. 56(1): p. 1–9. https://dx.doi.org/10.1366/0003702021954322
Lasch, P., L. Chiriboga, H. Yee, and M. Diem
Infrared spectroscopy of human cells and tissue: detection of disease. Technol Cancer Res Treat, 2002. 1(1): p. 1–7. https://www.ncbi.nlm.nih.gov/pubmed/12614171
Kneipp, J., P. Lasch, M. Beekes, and D. Naumann
In-situ spectroscopic investigation of transmissible spongiform encephalopathies: application of Fourier-transform infrared spectroscopy to a scrapie-hamster model. International Symposium on Biomedical Optics, 2002. 4614. https://dx.doi.org/10.1117/12.460795
Kneipp, J., P. Lasch, M. Beekes, and D. Naumann
In situ spectroscopic investigation of transmissible spongiform encephalopathies: Application of Fourier-transform infrared spectroscopy to a scrapie-hamster model. Proc SPIE, 2002. 4614: p. 12–19. https://dx.doi.org/10.1117/12.460795
Kneipp, J., M. Beekes, P. Lasch, and D. Naumann
Molecular changes of preclinical scrapie can be detected by infrared spectroscopy. J Neurosci, 2002. 22(8): p. 2989–97. https://www.ncbi.nlm.nih.gov/pubmed/11943801
Fabian, H., P. Lasch, M. Boese, and W. Haensch
Mid-IR microspectroscopic imaging of breast tumor tissue sections. Biopolymers, 2002. 67(4-5): p. 354–7. https://www.ncbi.nlm.nih.gov/pubmed/12012465